Functional clusters

Information

  • Type Gene Ontology
  • Description phospholipase C-inhibiting G protein-coupled receptor signaling pathway

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-2 3 CH_aar_268 2 2 0.000912326
Aethionema arabicum LG-8 3 CH_aar_269 2 2 0.000912326
Avicennia marina ScioBoG_13798_HRSCAF_13862 3 CH_ama_113 2 2 0.000517331
Avicennia marina ScioBoG_52287_HRSCAF_52434 3 CH_ama_114 2 2 0.000517331
Beta vulgaris Chr2_EL10_PGA_scaffold6 3 CH_bvu_242 2 2 0.00049675
Cannabis sativa NC_044371.1 3 CH_cansat_87 4 15 0.00000000579389
Cicer arietinum L. Ca_LG6_v3 3 CH_car_162 2 2 0.00023349
Coffea canephora chr6 3 CH_ccan_351 2 10 0.000459951
Citrus clementina scaffold_1 3 CH_ccl_356 2 2 0.000246093
Carpinus fangiana Cfa01 3 CH_cfa_275 2 2 0.000227204
Cardamine hirsuta Chr7 3 CH_chi_381 2 2 0.000691204
Carya illinoinensis Chr03 3 CH_cil_526 2 2 0.000929742
Cucumis melo chr05 3 CH_cme_210 2 2 0.000200133
Carica papaya supercontig_78 3 CH_cpa_180 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_3674 3 CH_cqu_566 2 2 0.000995025
Chenopodium quinoa C_Quinoa_Scaffold_2344 3 CH_cqu_567 2 2 0.000995025
Capsella rubella scaffold_7 3 CH_cru_334 2 2 0.000731154
Cucumis sativus L. chr2 3 CH_csa_235 2 2 0.000250428
Davidia involucrata GWHABJS00000013 3 CH_din_411 2 2 0.000750188
Erigeron canadensis Conyza_canadensis_scaffold:5 3 CH_eca_330 2 2 0.000134617
Fragaria vesca Fvb1 3 CH_fve_368 2 2 0.000589102
Glycine max Gm08 3 CH_gma_163 3 3 0.000000121016
Hydrangea macrophylla Hma1.2p1_0663F.1 3 CH_hma_304 2 2 0.000666519
Lupinus albus Lalb_Chr09 3 CH_lal_410 2 2 0.000787236
Lotus japonicus chr2 3 CH_lja_328 2 2 0.000429046
Lactuca sativa Lsat_1_v8_lg_8 3 CH_lsa_493 2 2 0.00077101
Lactuca sativa Lsat_1_v8_lg_7 3 CH_lsa_494 2 2 0.00077101
Magnolia biondii Chr04 3 CH_mbi_144 3 3 0.00000000353808
Nelumbo nucifera chr8 3 CH_nnu_314 2 2 0.000722526
Nelumbo nucifera chr6 3 CH_nnu_315 2 2 0.000722526
Nicotiana tabacum Nitab4.5_0000566 3 CH_nta_138 2 2 0.000658364
Oryza sativa ssp. japonica chr10 3 CH_osa_360 2 2 0.000158437
Prunus persica Pp07 3 CH_ppe_474 2 2 0.000745962
Pisum sativum chr7LG7 3 CH_psa_233 2 2 0.0000521635
Phaseolus vulgaris Chr02 3 CH_pvu_112 3 3 0.0000000809765
Rhododendron simsii chr05 3 CH_rsi_534 2 2 0.000967961
Schrenkiella parvula ch7-5 3 CH_spa_215 2 2 0.00078734
Trochodendron aralioides group9 3 CH_tar_183 3 4 0.00000181637
Theobroma cacao Chromosome_9 3 CH_tca_365 2 2 0.000439432
Trifolium pratense Tp57577_TGAC_v2_LG3 3 CH_tpr_290 2 2 0.000227092
Vigna mungo CM024069.1 3 CH_vmu_245 2 2 0.000193842
Vitis vinifera chr11 3 CH_vvi_381 2 2 0.000456378
Aethionema arabicum LG-2 4 CH_aar_268 2 2 0.000912326
Aethionema arabicum LG-8 4 CH_aar_269 2 2 0.000912326
Avicennia marina ScioBoG_13798_HRSCAF_13862 4 CH_ama_113 2 2 0.000517331
Avicennia marina ScioBoG_52287_HRSCAF_52434 4 CH_ama_114 2 2 0.000517331
Beta vulgaris Chr2_EL10_PGA_scaffold6 4 CH_bvu_242 2 2 0.00049675
Cannabis sativa NC_044371.1 4 CH_cansat_87 4 15 0.00000000579389
Cicer arietinum L. Ca_LG6_v3 4 CH_car_162 2 2 0.00023349
Coffea canephora chr6 4 CH_ccan_351 2 10 0.000459951
Citrus clementina scaffold_1 4 CH_ccl_356 2 2 0.000246093
Carpinus fangiana Cfa01 4 CH_cfa_275 2 2 0.000227204
Cardamine hirsuta Chr7 4 CH_chi_381 2 2 0.000691204
Carya illinoinensis Chr03 4 CH_cil_526 2 2 0.000929742
Cucumis melo chr05 4 CH_cme_210 2 2 0.000200133
Carica papaya supercontig_78 4 CH_cpa_180 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_3674 4 CH_cqu_566 2 2 0.000995025
Chenopodium quinoa C_Quinoa_Scaffold_2344 4 CH_cqu_567 2 2 0.000995025
Capsella rubella scaffold_7 4 CH_cru_334 2 2 0.000731154
Cucumis sativus L. chr2 4 CH_csa_235 2 2 0.000250428
Davidia involucrata GWHABJS00000013 4 CH_din_411 2 2 0.000750188
Erigeron canadensis Conyza_canadensis_scaffold:5 4 CH_eca_330 2 2 0.000134617
Fragaria vesca Fvb1 4 CH_fve_368 2 2 0.000589102
Glycine max Gm08 4 CH_gma_163 3 3 0.000000121016
Hydrangea macrophylla Hma1.2p1_0663F.1 4 CH_hma_304 2 2 0.000666519
Lupinus albus Lalb_Chr09 4 CH_lal_410 2 2 0.000787236
Lotus japonicus chr2 4 CH_lja_328 2 2 0.000429046
Lactuca sativa Lsat_1_v8_lg_8 4 CH_lsa_493 2 2 0.00077101
Lactuca sativa Lsat_1_v8_lg_7 4 CH_lsa_494 2 2 0.00077101
Magnolia biondii Chr04 4 CH_mbi_144 3 3 0.00000000353808
Nelumbo nucifera chr8 4 CH_nnu_314 2 2 0.000722526
Nelumbo nucifera chr6 4 CH_nnu_315 2 2 0.000722526
Nicotiana tabacum Nitab4.5_0000566 4 CH_nta_138 2 2 0.000658364
Oryza sativa ssp. japonica chr10 4 CH_osa_360 2 2 0.000158437
Prunus persica Pp07 4 CH_ppe_474 2 2 0.000745962
Pisum sativum chr7LG7 4 CH_psa_233 2 2 0.0000521635
Phaseolus vulgaris Chr02 4 CH_pvu_112 3 3 0.0000000809765
Rhododendron simsii chr05 4 CH_rsi_534 2 2 0.000967961
Schrenkiella parvula ch7-5 4 CH_spa_215 2 2 0.00078734
Trochodendron aralioides group9 4 CH_tar_183 3 4 0.00000181637
Theobroma cacao Chromosome_9 4 CH_tca_365 2 2 0.000439432
Trifolium pratense Tp57577_TGAC_v2_LG3 4 CH_tpr_290 2 2 0.000227092
Vigna mungo CM024069.1 4 CH_vmu_245 2 2 0.000193842
Vitis vinifera chr11 4 CH_vvi_381 2 2 0.000456378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001