Functional clusters

Information

  • Type Gene Ontology
  • Description pectinesterase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 3 CH_aag_46 6 45 0.0000000601396
Acer truncatum chr7 3 CH_acertr_74 5 6 0.00000000235223
Actinidia chinensis Lachesis_group5 3 CH_ach_153 3 3 0.000143895
Actinidia chinensis Lachesis_group22 3 CH_ach_245 3 4 0.000574908
Arabidopsis lyrata scaffold_6 3 CH_aly_273 3 3 0.0003424
Arabidopsis lyrata scaffold_3 3 CH_aly_274 3 3 0.0003424
Avicennia marina ScioBoG_13798_HRSCAF_13862 3 CH_ama_21 4 4 0.000000175763
Avicennia marina ScioBoG_25048_HRSCAF_25167 3 CH_ama_70 3 3 0.000110179
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 3 CH_amhyb_202 3 4 0.000688385
Amaranthus hybridus AmaHy_arrow1_Scaffold_14 3 CH_amhyb_85 4 8 0.0000222098
Aquilegia oxysepala CHR07 3 CH_aox_12 7 7 0.0000000000000130246
Aquilegia oxysepala CHR02 3 CH_aox_19 6 6 0.00000000000559901
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 3 CH_arhy_159 6 6 0.0000000000197997
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 3 CH_arhy_200 6 8 0.000000000551974
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 3 CH_arhy_349 5 10 0.00000193975
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 3 CH_arhy_375 4 4 0.0000030393
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 3 CH_arhy_376 4 4 0.0000030393
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 3 CH_arhy_40 12 19 2.35457e-22
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 3 CH_arhy_416 4 5 0.0000151652
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 3 CH_arhy_417 4 5 0.0000151652
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 3 CH_arhy_501 4 7 0.000105719
Arabidopsis thaliana Chr1 3 CH_ath_501 5 45 0.000275385
Amborella trichopoda AmTr_v1.0_scaffold00129 3 CH_atr_21 11 39 1.4239e-17
Amborella trichopoda AmTr_v1.0_scaffold00007 3 CH_atr_232 3 3 0.000163735
Brassica carinata ChrC05 3 CH_bca_410 4 5 0.00000753323
Brassica carinata ChrC05 3 CH_bca_927 3 3 0.00075906
Brassica carinata ChrC02 3 CH_bca_928 3 3 0.00075906
Brassica carinata ChrC02 3 CH_bca_929 3 3 0.00075906
Brassica carinata ChrC06 3 CH_bca_930 3 3 0.00075906
Brassica napus C01 3 CH_bna_131 6 11 0.00000000372385
Brassica napus A01 3 CH_bna_402 4 6 0.000029291
Brassica napus C05 3 CH_bna_684 3 3 0.000955176
Brassica napus C09 3 CH_bna_685 3 3 0.000955176
Brassica napus C09 3 CH_bna_686 3 3 0.000955176
Brassica oleracea C4 3 CH_bol_234 5 20 0.0000268586
Brassica oleracea C5 3 CH_bol_351 3 3 0.000473152
Brassica oleracea C9 3 CH_bol_352 3 3 0.000473152
Brassica oleracea C1 3 CH_bol_73 6 12 0.00000000310508
Brassica rapa A05 3 CH_bra_277 3 3 0.00059668
Brassica rapa A01 3 CH_bra_72 5 7 0.0000000652431
Beta vulgaris Chr1_EL10_PGA_scaffold3 3 CH_bvu_196 3 3 0.000166725
Camellia sinensis var. sinensis Chr7 3 CH_camsi_21 11 16 8.43009e-23
Camellia sinensis var. sinensis Chr3 3 CH_camsi_245 5 9 0.000000106431
Camellia sinensis var. sinensis Chr2 3 CH_camsi_409 4 6 0.00000719835
Camellia sinensis var. sinensis Chr3 3 CH_camsi_43 10 31 5.13204e-16
Cannabis sativa NC_044375.1 3 CH_cansat_254 3 3 0.000169685
Capsicum annuum PGAv.1.6.scaffold503 3 CH_can_403 3 3 0.000406528
Capsicum annuum PGAv.1.6.scaffold1273 3 CH_can_404 3 3 0.000406528
Capsicum annuum PGAv.1.6.scaffold1274 3 CH_can_405 3 3 0.000406528
Cicer arietinum L. Ca_LG4_v3 3 CH_car_194 3 3 0.000565153
Cicer arietinum L. Ca_LG3_v3 3 CH_car_195 3 3 0.000565153
Cicer arietinum L. Ca_LG1_v3 3 CH_car_52 4 4 0.00000153963
Corylus avellana 8 3 CH_cav_214 4 8 0.0000297465
Corylus avellana 8 3 CH_cav_308 3 3 0.000218713
Chara braunii BFEA01000238 3 CH_cbr_121 3 4 0.000139423
Coffea canephora chr3 3 CH_ccan_213 3 8 0.0000495087
Coffea canephora chr0 3 CH_ccan_63 4 11 0.0000000132835
Citrus clementina scaffold_8 3 CH_ccl_108 5 5 0.00000000107427
Citrus clementina scaffold_3 3 CH_ccl_159 5 8 0.00000005985
Citrus clementina scaffold_1 3 CH_ccl_67 7 9 0.000000000000152549
Ceratophyllum demersum 3 3 CH_cde_22 6 9 0.000000000756808
Ceratophyllum demersum 5 3 CH_cde_25 7 20 0.0000000017267
Ceratophyllum demersum 3 3 CH_cde_92 4 7 0.0000471339
Carpinus fangiana Cfa01 3 CH_cfa_141 5 14 0.00000103319
Cardamine hirsuta Chr2 3 CH_chi_164 4 5 0.00000427489
Cardamine hirsuta Chr1 3 CH_chi_318 3 3 0.000375492
Cardamine hirsuta Chr3 3 CH_chi_319 3 3 0.000375492
Cardamine hirsuta Chr6 3 CH_chi_320 3 3 0.000375492
Carya illinoinensis Chr04 3 CH_cil_430 3 3 0.000217956
Carya illinoinensis Chr03 3 CH_cil_513 3 4 0.000870602
Carya illinoinensis Chr07 3 CH_cil_514 3 4 0.000870602
Citrullus lanatus CG_Chr03 3 CH_cla_88 4 8 0.0000308635
Corchorus olitorius AWUE01012367.1 3 CH_col_58 3 3 0.0000582405
Chenopodium quinoa C_Quinoa_Scaffold_2751 3 CH_cqu_464 3 3 0.000422913
Chenopodium quinoa C_Quinoa_Scaffold_1426 3 CH_cqu_465 3 3 0.000422913
Capsella rubella scaffold_6 3 CH_cru_312 3 3 0.000498756
Capsella rubella scaffold_6 3 CH_cru_313 3 3 0.000498756
Daucus carota DCARv2_Chr9 3 CH_dca_102 5 6 0.0000000430423
Daucus carota DCARv2_Chr6 3 CH_dca_164 4 4 0.00000247786
Daucus carota DCARv2_Chr9 3 CH_dca_201 4 5 0.0000123602
Daucus carota DCARv2_Chr6 3 CH_dca_401 3 3 0.000844547
Davidia involucrata GWHABJS00000001 3 CH_din_126 4 4 0.0000002541
Davidia involucrata GWHABJS00000015 3 CH_din_127 4 4 0.0000002541
Davidia involucrata GWHABJS00000005 3 CH_din_388 3 4 0.000654765
Durio zibethinus NW_019167882.1 3 CH_dzi_170 5 19 0.00000729257
Durio zibethinus NW_019168159.1 3 CH_dzi_69 5 5 0.000000000639527
Erigeron canadensis Conyza_canadensis_scaffold:7 3 CH_eca_285 3 3 0.0000981883
Erigeron canadensis Conyza_canadensis_scaffold:7 3 CH_eca_286 3 3 0.0000981883
Erigeron canadensis Conyza_canadensis_scaffold:9 3 CH_eca_487 3 5 0.00097999
Eucalyptus grandis Chr05 3 CH_egr_190 6 6 0.0000000000000207873
Eucalyptus grandis Chr02 3 CH_egr_415 4 4 0.0000000278953
Eucalyptus grandis Chr06 3 CH_egr_645 3 3 0.0000307478
Eucalyptus grandis Chr08 3 CH_egr_646 3 3 0.0000307478
Erythranthe guttata scaffold_14 3 CH_egut_119 5 5 0.00000000363963
Erythranthe guttata scaffold_10 3 CH_egut_120 5 5 0.00000000363963
Erythranthe guttata scaffold_10 3 CH_egut_235 4 6 0.0000210292
Erythranthe guttata scaffold_12 3 CH_egut_392 3 3 0.000537043
Eutrema salsugineum scaffold_3 3 CH_esa_216 3 3 0.000282781
Fragaria x ananassa Fvb7-2 3 CH_fan_213 4 4 0.00000180499
Fragaria x ananassa Fvb1-1 3 CH_fan_392 4 8 0.000125539
Fragaria x ananassa Fvb1-4 3 CH_fan_534 5 32 0.00069442
Fragaria x ananassa Fvb7-4 3 CH_fan_558 3 3 0.000899043
Fragaria x ananassa Fvb5-2 3 CH_fan_559 3 3 0.000899043
Fragaria vesca Fvb7 3 CH_fve_119 5 8 0.0000000325984
Fragaria vesca Fvb1 3 CH_fve_168 6 35 0.00000152801
Fragaria vesca Fvb5 3 CH_fve_308 3 3 0.000196882
Gossypium hirsutum A09 3 CH_ghi_108 6 6 0.00000000000970636
Gossypium hirsutum D05 3 CH_ghi_294 4 4 0.00000196417
Gossypium hirsutum D12 3 CH_ghi_39 9 9 1.01905e-19
Gossypium hirsutum A05 3 CH_ghi_672 3 3 0.000875691
Gossypium hirsutum A12 3 CH_ghi_673 3 3 0.000875691
Gossypium hirsutum D09 3 CH_ghi_75 7 7 0.0000000000000213834
Glycine max Gm15 3 CH_gma_127 5 6 0.0000000185338
Glycine max Gm09 3 CH_gma_168 5 8 0.000000172342
Glycine max Gm17 3 CH_gma_487 3 3 0.000622323
Glycine max Gm19 3 CH_gma_488 3 3 0.000622323
Gossypium raimondii Chr09 3 CH_gra_310 3 3 0.000367838
Gossypium raimondii Chr08 3 CH_gra_34 7 7 0.00000000000000650376
Helianthus annuus HanXRQChr07 3 CH_han_22 13 37 5.06865e-23
Helianthus annuus HanXRQChr12 3 CH_han_286 4 4 0.000000367636
Helianthus annuus HanXRQChr04 3 CH_han_573 3 3 0.000229236
Helianthus annuus HanXRQChr14 3 CH_han_574 3 3 0.000229236
Lotus japonicus chr5 3 CH_lja_334 3 3 0.000477063
Lonicera japonica GWHAAZE00000003 3 CH_lonja_260 5 10 0.000000542887
Lonicera japonica GWHAAZE00000009 3 CH_lonja_522 3 3 0.000425438
Lonicera japonica GWHAAZE00000004 3 CH_lonja_523 3 3 0.000425438
Lonicera japonica GWHAAZE00000005 3 CH_lonja_88 9 21 0.0000000000000138767
Lactuca sativa Lsat_1_v8_lg_1 3 CH_lsa_111 5 5 0.000000000338825
Lactuca sativa Lsat_1_v8_lg_4 3 CH_lsa_156 5 8 0.0000000189033
Lactuca sativa Lsat_1_v8_lg_5 3 CH_lsa_291 6 56 0.0000151332
Lactuca sativa Lsat_1_v8_lg_3 3 CH_lsa_360 3 3 0.000149886
Magnolia biondii Chr19 3 CH_mbi_163 7 48 0.0000000168968
Malus domestica Chr02 3 CH_mdo_110 6 10 0.000000000299994
Malus domestica Chr16 3 CH_mdo_257 4 4 0.000000498907
Malus domestica Chr11 3 CH_mdo_300 4 5 0.00000249108
Malus domestica Chr15 3 CH_mdo_568 3 3 0.000289141
Malus domestica Chr15 3 CH_mdo_723 4 16 0.000893046
Manihot esculenta Chromosome16 3 CH_mes_156 5 6 0.0000000494431
Manihot esculenta Chromosome14 3 CH_mes_37 9 9 5.72694e-19
Manihot esculenta Chromosome05 3 CH_mes_437 3 3 0.000932111
Manihot esculenta Chromosome01 3 CH_mes_438 3 3 0.000932111
Manihot esculenta Chromosome12 3 CH_mes_439 3 3 0.000932111
Medicago truncatula chr7 3 CH_mtr_191 6 10 0.00000000099281
Medicago truncatula chr1 3 CH_mtr_240 5 6 0.0000000136099
Medicago truncatula chr7 3 CH_mtr_355 4 4 0.00000107384
Medicago truncatula chr4 3 CH_mtr_440 4 6 0.0000160525
Medicago truncatula chr5 3 CH_mtr_703 3 3 0.0005026
Nelumbo nucifera chr4 3 CH_nnu_121 4 4 0.00000102251
Nelumbo nucifera chr1 3 CH_nnu_177 5 21 0.0000438155
Nelumbo nucifera chr3 3 CH_nnu_287 3 3 0.000466523
Nelumbo nucifera chr4 3 CH_nnu_42 6 8 0.000000000132555
Nelumbo nucifera chr6 3 CH_nnu_48 6 10 0.000000000990505
Nicotiana tabacum Nitab4.5_0001270 3 CH_nta_32 5 8 0.000000157245
Petunia axillaris Peaxi162Scf00646 3 CH_pax_309 3 3 0.000461814
Petunia axillaris Peaxi162Scf00036 3 CH_pax_310 3 3 0.000461814
Petunia axillaris Peaxi162Scf00003 3 CH_pax_311 3 3 0.000461814
Petunia axillaris Peaxi162Scf00110 3 CH_pax_312 3 3 0.000461814
Punica granatum NC_045128.1 3 CH_pgr_202 4 6 0.00000646436
Punica granatum NC_045133.1 3 CH_pgr_93 5 5 0.000000000827283
Physcomitrium patens Chr05 3 CH_ppa_79 4 11 0.0000439743
Prunus persica Pp06 3 CH_ppe_225 4 4 0.00000107668
Prunus persica Pp02 3 CH_ppe_226 4 4 0.00000107668
Prunus persica Pp07 3 CH_ppe_229 6 26 0.00000137718
Prunus persica Pp08 3 CH_ppe_415 3 3 0.000437344
Pisum sativum chr7LG7 3 CH_psa_140 6 34 0.00000160627
Pisum sativum chr4LG4 3 CH_psa_299 3 3 0.000233287
Pisum sativum chr5LG3 3 CH_psa_33 7 11 0.000000000000692412
Papaver somniferum NC_039360.1 3 CH_pso_251 4 4 0.00000014579
Papaver somniferum NW_020651082.1 3 CH_pso_330 6 48 0.00000207481
Papaver somniferum NW_020642151.1 3 CH_pso_498 3 3 0.000130727
Papaver somniferum NW_020624376.1 3 CH_pso_499 3 3 0.000130727
Papaver somniferum NW_020631041.1 3 CH_pso_76 8 24 0.000000000000147445
Papaver somniferum NW_020618825.1 3 CH_pso_99 8 33 0.00000000000209266
Populus trichocarpa Chr01 3 CH_ptr_225 4 4 0.000000704178
Phaseolus vulgaris Chr02 3 CH_pvu_155 4 4 0.00000129523
Phaseolus vulgaris Chr08 3 CH_pvu_203 4 6 0.0000193483
Phaseolus vulgaris Chr03 3 CH_pvu_343 3 3 0.000503642
Phaseolus vulgaris Chr06 3 CH_pvu_344 3 3 0.000503642
Phaseolus vulgaris Chr07 3 CH_pvu_345 3 3 0.000503642
Phaseolus vulgaris Chr09 3 CH_pvu_63 6 7 0.0000000000573025
Quercus lobata 6 3 CH_qlo_48 11 12 3.38082e-24
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_282 5 14 0.000000157548
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_402 4 8 0.00000523761
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_463 4 11 0.0000246276
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_542 3 3 0.0000697531
Rhododendron simsii chr01 3 CH_rsi_160 5 7 0.00000000947672
Rhododendron simsii chr05 3 CH_rsi_373 4 11 0.0000898872
Striga asiatica scaffold21 3 CH_sas_29 4 5 0.00000134579
Striga asiatica scaffold56 3 CH_sas_84 4 13 0.000190406
Salvia bowleyana GWHASIU00000003 3 CH_sbo_115 5 5 0.000000000517787
Salvia bowleyana GWHASIU00000003 3 CH_sbo_133 6 14 0.00000000241472
Salvia bowleyana GWHASIU00000007 3 CH_sbo_174 8 80 0.00000005039
Salvia bowleyana GWHASIU00000003 3 CH_sbo_397 3 3 0.000201289
Salvia bowleyana GWHASIU00000004 3 CH_sbo_398 3 3 0.000201289
Salix brachista GWHAAZH00000006 3 CH_sbr_152 4 4 0.000000688323
Salix brachista GWHAAZH00000014 3 CH_sbr_312 3 3 0.000326049
Simmondsia chinensis GWHAASQ00000008 3 CH_sci_177 4 10 0.000112715
Simmondsia chinensis GWHAASQ00000016 3 CH_sci_193 3 3 0.000254743
Simmondsia chinensis GWHAASQ00000023 3 CH_sci_73 4 4 0.000000542283
Sechium edule LG04 3 CH_sed_228 3 3 0.000365744
Sequoiadendron giganteum chr4 3 CH_sgi_26 17 24 1.79355e-35
Sequoiadendron giganteum chr8 3 CH_sgi_638 5 8 0.000000195871
Sequoiadendron giganteum chr7 3 CH_sgi_686 5 9 0.000000439832
Sequoiadendron giganteum chr2 3 CH_sgi_737 4 4 0.00000147398
Sequoiadendron giganteum chr4 3 CH_sgi_79 12 15 5.24668e-25
Sequoiadendron giganteum chr3 3 CH_sgi_826 5 14 0.00000691907
Solanum lycopersicum SL4.0ch01 3 CH_sly_116 5 5 0.00000000292017
Solanum lycopersicum SL4.0ch10 3 CH_sly_187 5 9 0.000000365027
Solanum lycopersicum SL4.0ch01 3 CH_sly_522 3 3 0.000510408
Solanum lycopersicum SL4.0ch11 3 CH_sly_523 3 3 0.000510408
Selaginella moellendorffii scaffold_1 3 CH_smo_111 3 4 0.0000805015
Schrenkiella parvula ch6-1 3 CH_spa_173 3 3 0.000334668
Schrenkiella parvula ch6-6 3 CH_spa_174 3 3 0.000334668
Solanum pennellii Spenn-ch01 3 CH_spe_320 3 3 0.000112236
Selenicereus undatus Scaffold_33679 3 CH_sun_225 3 7 0.000718841
Trochodendron aralioides group9 3 CH_tar_140 4 4 0.000000256459
Trochodendron aralioides group15 3 CH_tar_315 3 3 0.000158202
Theobroma cacao Chromosome_5 3 CH_tca_244 4 10 0.0000400853
Theobroma cacao Chromosome_9 3 CH_tca_63 6 8 0.0000000000124071
Tarenaya hassleriana NW_010965775.1 3 CH_tha_151 3 3 0.00041827
Tarenaya hassleriana NW_010971389.1 3 CH_tha_152 3 3 0.00041827
Trifolium pratense Tp57577_TGAC_v2_LG6 3 CH_tpr_117 4 4 0.00000176116
Trifolium pratense Tp57577_TGAC_v2_LG2 3 CH_tpr_150 4 5 0.000008786
Trifolium pratense Tp57577_TGAC_v2_LG5 3 CH_tpr_151 4 5 0.000008786
Trifolium pratense Tp57577_TGAC_v2_LG1 3 CH_tpr_176 4 6 0.0000262987
Trifolium pratense Tp57577_TGAC_v2_scaf_361 3 CH_tpr_177 4 6 0.0000262987
Tripterygium wilfordii NC_052249.1 3 CH_twi_255 3 3 0.000185394
Tripterygium wilfordii NC_052254.1 3 CH_twi_256 3 3 0.000185394
Tripterygium wilfordii NC_052240.1 3 CH_twi_317 3 4 0.000740625
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_325 3 3 0.000399674
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_326 3 3 0.000399674
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_63 6 9 0.0000000005269
Vigna mungo CM024078.1 3 CH_vmu_189 4 8 0.0000647106
Vigna mungo CM024075.1 3 CH_vmu_287 3 3 0.000405972
Vigna mungo CM024072.1 3 CH_vmu_74 5 7 0.0000000440649
Vigna mungo CM024073.1 3 CH_vmu_96 5 9 0.000000263391
Vanilla planifolia CM028153.1 3 CH_vpl_330 3 3 0.000575719
Vitis vinifera chr6 3 CH_vvi_184 4 5 0.0000015182
Zea mays 5 3 CH_zma_53 5 6 0.00000000088187
Anthoceros agrestis Sc2ySwM_228 4 CH_aag_46 6 45 0.0000000601396
Acer truncatum chr7 4 CH_acertr_74 5 6 0.00000000235223
Actinidia chinensis Lachesis_group5 4 CH_ach_153 3 3 0.000143895
Actinidia chinensis Lachesis_group22 4 CH_ach_245 3 4 0.000574908
Arabidopsis lyrata scaffold_6 4 CH_aly_273 3 3 0.0003424
Arabidopsis lyrata scaffold_3 4 CH_aly_274 3 3 0.0003424
Avicennia marina ScioBoG_13798_HRSCAF_13862 4 CH_ama_21 4 4 0.000000175763
Avicennia marina ScioBoG_25048_HRSCAF_25167 4 CH_ama_70 3 3 0.000110179
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 4 CH_amhyb_202 3 4 0.000688385
Amaranthus hybridus AmaHy_arrow1_Scaffold_14 4 CH_amhyb_85 4 8 0.0000222098
Aquilegia oxysepala CHR07 4 CH_aox_12 7 7 0.0000000000000130246
Aquilegia oxysepala CHR02 4 CH_aox_19 6 6 0.00000000000559901
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 4 CH_arhy_159 6 6 0.0000000000197997
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 4 CH_arhy_200 6 8 0.000000000551974
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 4 CH_arhy_349 5 10 0.00000193975
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 4 CH_arhy_375 4 4 0.0000030393
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 4 CH_arhy_376 4 4 0.0000030393
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 4 CH_arhy_40 12 19 2.35457e-22
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 4 CH_arhy_416 4 5 0.0000151652
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 4 CH_arhy_417 4 5 0.0000151652
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 4 CH_arhy_501 4 7 0.000105719
Arabidopsis thaliana Chr1 4 CH_ath_501 5 45 0.000275385
Amborella trichopoda AmTr_v1.0_scaffold00129 4 CH_atr_21 11 39 1.4239e-17
Amborella trichopoda AmTr_v1.0_scaffold00007 4 CH_atr_232 3 3 0.000163735
Brassica carinata ChrC05 4 CH_bca_410 4 5 0.00000753323
Brassica carinata ChrC05 4 CH_bca_927 3 3 0.00075906
Brassica carinata ChrC02 4 CH_bca_928 3 3 0.00075906
Brassica carinata ChrC02 4 CH_bca_929 3 3 0.00075906
Brassica carinata ChrC06 4 CH_bca_930 3 3 0.00075906
Brassica napus C01 4 CH_bna_131 6 11 0.00000000372385
Brassica napus A01 4 CH_bna_402 4 6 0.000029291
Brassica napus C05 4 CH_bna_684 3 3 0.000955176
Brassica napus C09 4 CH_bna_685 3 3 0.000955176
Brassica napus C09 4 CH_bna_686 3 3 0.000955176
Brassica oleracea C4 4 CH_bol_234 5 20 0.0000268586
Brassica oleracea C5 4 CH_bol_351 3 3 0.000473152
Brassica oleracea C9 4 CH_bol_352 3 3 0.000473152
Brassica oleracea C1 4 CH_bol_73 6 12 0.00000000310508
Brassica rapa A05 4 CH_bra_277 3 3 0.00059668
Brassica rapa A01 4 CH_bra_72 5 7 0.0000000652431
Beta vulgaris Chr1_EL10_PGA_scaffold3 4 CH_bvu_196 3 3 0.000166725
Camellia sinensis var. sinensis Chr7 4 CH_camsi_21 11 16 8.43009e-23
Camellia sinensis var. sinensis Chr3 4 CH_camsi_245 5 9 0.000000106431
Camellia sinensis var. sinensis Chr2 4 CH_camsi_409 4 6 0.00000719835
Camellia sinensis var. sinensis Chr3 4 CH_camsi_43 10 31 5.13204e-16
Cannabis sativa NC_044375.1 4 CH_cansat_254 3 3 0.000169685
Capsicum annuum PGAv.1.6.scaffold503 4 CH_can_403 3 3 0.000406528
Capsicum annuum PGAv.1.6.scaffold1273 4 CH_can_404 3 3 0.000406528
Capsicum annuum PGAv.1.6.scaffold1274 4 CH_can_405 3 3 0.000406528
Cicer arietinum L. Ca_LG4_v3 4 CH_car_194 3 3 0.000565153
Cicer arietinum L. Ca_LG3_v3 4 CH_car_195 3 3 0.000565153
Cicer arietinum L. Ca_LG1_v3 4 CH_car_52 4 4 0.00000153963
Corylus avellana 8 4 CH_cav_214 4 8 0.0000297465
Corylus avellana 8 4 CH_cav_308 3 3 0.000218713
Chara braunii BFEA01000238 4 CH_cbr_121 3 4 0.000139423
Coffea canephora chr3 4 CH_ccan_213 3 8 0.0000495087
Coffea canephora chr0 4 CH_ccan_63 4 11 0.0000000132835
Citrus clementina scaffold_8 4 CH_ccl_108 5 5 0.00000000107427
Citrus clementina scaffold_3 4 CH_ccl_159 5 8 0.00000005985
Citrus clementina scaffold_1 4 CH_ccl_67 7 9 0.000000000000152549
Ceratophyllum demersum 3 4 CH_cde_22 6 9 0.000000000756808
Ceratophyllum demersum 5 4 CH_cde_25 7 20 0.0000000017267
Ceratophyllum demersum 3 4 CH_cde_92 4 7 0.0000471339
Carpinus fangiana Cfa01 4 CH_cfa_141 5 14 0.00000103319
Cardamine hirsuta Chr2 4 CH_chi_164 4 5 0.00000427489
Cardamine hirsuta Chr1 4 CH_chi_318 3 3 0.000375492
Cardamine hirsuta Chr3 4 CH_chi_319 3 3 0.000375492
Cardamine hirsuta Chr6 4 CH_chi_320 3 3 0.000375492
Carya illinoinensis Chr04 4 CH_cil_430 3 3 0.000217956
Carya illinoinensis Chr03 4 CH_cil_513 3 4 0.000870602
Carya illinoinensis Chr07 4 CH_cil_514 3 4 0.000870602
Citrullus lanatus CG_Chr03 4 CH_cla_88 4 8 0.0000308635
Corchorus olitorius AWUE01012367.1 4 CH_col_58 3 3 0.0000582405
Chenopodium quinoa C_Quinoa_Scaffold_2751 4 CH_cqu_464 3 3 0.000422913
Chenopodium quinoa C_Quinoa_Scaffold_1426 4 CH_cqu_465 3 3 0.000422913
Capsella rubella scaffold_6 4 CH_cru_312 3 3 0.000498756
Capsella rubella scaffold_6 4 CH_cru_313 3 3 0.000498756
Daucus carota DCARv2_Chr9 4 CH_dca_102 5 6 0.0000000430423
Daucus carota DCARv2_Chr6 4 CH_dca_164 4 4 0.00000247786
Daucus carota DCARv2_Chr9 4 CH_dca_201 4 5 0.0000123602
Daucus carota DCARv2_Chr6 4 CH_dca_401 3 3 0.000844547
Davidia involucrata GWHABJS00000001 4 CH_din_126 4 4 0.0000002541
Davidia involucrata GWHABJS00000015 4 CH_din_127 4 4 0.0000002541
Davidia involucrata GWHABJS00000005 4 CH_din_388 3 4 0.000654765
Durio zibethinus NW_019167882.1 4 CH_dzi_170 5 19 0.00000729257
Durio zibethinus NW_019168159.1 4 CH_dzi_69 5 5 0.000000000639527
Erigeron canadensis Conyza_canadensis_scaffold:7 4 CH_eca_285 3 3 0.0000981883
Erigeron canadensis Conyza_canadensis_scaffold:7 4 CH_eca_286 3 3 0.0000981883
Erigeron canadensis Conyza_canadensis_scaffold:9 4 CH_eca_487 3 5 0.00097999
Eucalyptus grandis Chr05 4 CH_egr_190 6 6 0.0000000000000207873
Eucalyptus grandis Chr02 4 CH_egr_415 4 4 0.0000000278953
Eucalyptus grandis Chr06 4 CH_egr_645 3 3 0.0000307478
Eucalyptus grandis Chr08 4 CH_egr_646 3 3 0.0000307478
Erythranthe guttata scaffold_14 4 CH_egut_119 5 5 0.00000000363963
Erythranthe guttata scaffold_10 4 CH_egut_120 5 5 0.00000000363963
Erythranthe guttata scaffold_10 4 CH_egut_235 4 6 0.0000210292
Erythranthe guttata scaffold_12 4 CH_egut_392 3 3 0.000537043
Eutrema salsugineum scaffold_3 4 CH_esa_216 3 3 0.000282781
Fragaria x ananassa Fvb7-2 4 CH_fan_213 4 4 0.00000180499
Fragaria x ananassa Fvb1-1 4 CH_fan_392 4 8 0.000125539
Fragaria x ananassa Fvb1-4 4 CH_fan_534 5 32 0.00069442
Fragaria x ananassa Fvb7-4 4 CH_fan_558 3 3 0.000899043
Fragaria x ananassa Fvb5-2 4 CH_fan_559 3 3 0.000899043
Fragaria vesca Fvb7 4 CH_fve_119 5 8 0.0000000325984
Fragaria vesca Fvb1 4 CH_fve_168 6 35 0.00000152801
Fragaria vesca Fvb5 4 CH_fve_308 3 3 0.000196882
Gossypium hirsutum A09 4 CH_ghi_108 6 6 0.00000000000970636
Gossypium hirsutum D05 4 CH_ghi_294 4 4 0.00000196417
Gossypium hirsutum D12 4 CH_ghi_39 9 9 1.01905e-19
Gossypium hirsutum A05 4 CH_ghi_672 3 3 0.000875691
Gossypium hirsutum A12 4 CH_ghi_673 3 3 0.000875691
Gossypium hirsutum D09 4 CH_ghi_75 7 7 0.0000000000000213834
Glycine max Gm15 4 CH_gma_127 5 6 0.0000000185338
Glycine max Gm09 4 CH_gma_168 5 8 0.000000172342
Glycine max Gm17 4 CH_gma_487 3 3 0.000622323
Glycine max Gm19 4 CH_gma_488 3 3 0.000622323
Gossypium raimondii Chr09 4 CH_gra_310 3 3 0.000367838
Gossypium raimondii Chr08 4 CH_gra_34 7 7 0.00000000000000650376
Helianthus annuus HanXRQChr07 4 CH_han_22 13 37 5.06865e-23
Helianthus annuus HanXRQChr12 4 CH_han_286 4 4 0.000000367636
Helianthus annuus HanXRQChr04 4 CH_han_573 3 3 0.000229236
Helianthus annuus HanXRQChr14 4 CH_han_574 3 3 0.000229236
Lotus japonicus chr5 4 CH_lja_334 3 3 0.000477063
Lonicera japonica GWHAAZE00000003 4 CH_lonja_260 5 10 0.000000542887
Lonicera japonica GWHAAZE00000009 4 CH_lonja_522 3 3 0.000425438
Lonicera japonica GWHAAZE00000004 4 CH_lonja_523 3 3 0.000425438
Lonicera japonica GWHAAZE00000005 4 CH_lonja_88 9 21 0.0000000000000138767
Lactuca sativa Lsat_1_v8_lg_1 4 CH_lsa_111 5 5 0.000000000338825
Lactuca sativa Lsat_1_v8_lg_4 4 CH_lsa_156 5 8 0.0000000189033
Lactuca sativa Lsat_1_v8_lg_5 4 CH_lsa_291 6 56 0.0000151332
Lactuca sativa Lsat_1_v8_lg_3 4 CH_lsa_360 3 3 0.000149886
Magnolia biondii Chr19 4 CH_mbi_163 7 48 0.0000000168968
Malus domestica Chr02 4 CH_mdo_110 6 10 0.000000000299994
Malus domestica Chr16 4 CH_mdo_257 4 4 0.000000498907
Malus domestica Chr11 4 CH_mdo_300 4 5 0.00000249108
Malus domestica Chr15 4 CH_mdo_568 3 3 0.000289141
Malus domestica Chr15 4 CH_mdo_723 4 16 0.000893046
Manihot esculenta Chromosome16 4 CH_mes_156 5 6 0.0000000494431
Manihot esculenta Chromosome14 4 CH_mes_37 9 9 5.72694e-19
Manihot esculenta Chromosome05 4 CH_mes_437 3 3 0.000932111
Manihot esculenta Chromosome01 4 CH_mes_438 3 3 0.000932111
Manihot esculenta Chromosome12 4 CH_mes_439 3 3 0.000932111
Medicago truncatula chr7 4 CH_mtr_191 6 10 0.00000000099281
Medicago truncatula chr1 4 CH_mtr_240 5 6 0.0000000136099
Medicago truncatula chr7 4 CH_mtr_355 4 4 0.00000107384
Medicago truncatula chr4 4 CH_mtr_440 4 6 0.0000160525
Medicago truncatula chr5 4 CH_mtr_703 3 3 0.0005026
Nelumbo nucifera chr4 4 CH_nnu_121 4 4 0.00000102251
Nelumbo nucifera chr1 4 CH_nnu_177 5 21 0.0000438155
Nelumbo nucifera chr3 4 CH_nnu_287 3 3 0.000466523
Nelumbo nucifera chr4 4 CH_nnu_42 6 8 0.000000000132555
Nelumbo nucifera chr6 4 CH_nnu_48 6 10 0.000000000990505
Nicotiana tabacum Nitab4.5_0001270 4 CH_nta_32 5 8 0.000000157245
Petunia axillaris Peaxi162Scf00646 4 CH_pax_309 3 3 0.000461814
Petunia axillaris Peaxi162Scf00036 4 CH_pax_310 3 3 0.000461814
Petunia axillaris Peaxi162Scf00003 4 CH_pax_311 3 3 0.000461814
Petunia axillaris Peaxi162Scf00110 4 CH_pax_312 3 3 0.000461814
Punica granatum NC_045128.1 4 CH_pgr_202 4 6 0.00000646436
Punica granatum NC_045133.1 4 CH_pgr_93 5 5 0.000000000827283
Physcomitrium patens Chr05 4 CH_ppa_79 4 11 0.0000439743
Prunus persica Pp06 4 CH_ppe_225 4 4 0.00000107668
Prunus persica Pp02 4 CH_ppe_226 4 4 0.00000107668
Prunus persica Pp07 4 CH_ppe_229 6 26 0.00000137718
Prunus persica Pp08 4 CH_ppe_415 3 3 0.000437344
Pisum sativum chr7LG7 4 CH_psa_140 6 34 0.00000160627
Pisum sativum chr4LG4 4 CH_psa_299 3 3 0.000233287
Pisum sativum chr5LG3 4 CH_psa_33 7 11 0.000000000000692412
Papaver somniferum NC_039360.1 4 CH_pso_251 4 4 0.00000014579
Papaver somniferum NW_020651082.1 4 CH_pso_330 6 48 0.00000207481
Papaver somniferum NW_020642151.1 4 CH_pso_498 3 3 0.000130727
Papaver somniferum NW_020624376.1 4 CH_pso_499 3 3 0.000130727
Papaver somniferum NW_020631041.1 4 CH_pso_76 8 24 0.000000000000147445
Papaver somniferum NW_020618825.1 4 CH_pso_99 8 33 0.00000000000209266
Populus trichocarpa Chr01 4 CH_ptr_225 4 4 0.000000704178
Phaseolus vulgaris Chr02 4 CH_pvu_155 4 4 0.00000129523
Phaseolus vulgaris Chr08 4 CH_pvu_203 4 6 0.0000193483
Phaseolus vulgaris Chr03 4 CH_pvu_343 3 3 0.000503642
Phaseolus vulgaris Chr06 4 CH_pvu_344 3 3 0.000503642
Phaseolus vulgaris Chr07 4 CH_pvu_345 3 3 0.000503642
Phaseolus vulgaris Chr09 4 CH_pvu_63 6 7 0.0000000000573025
Quercus lobata 6 4 CH_qlo_48 11 12 3.38082e-24
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_282 5 14 0.000000157548
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_402 4 8 0.00000523761
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_463 4 11 0.0000246276
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_542 3 3 0.0000697531
Rhododendron simsii chr01 4 CH_rsi_160 5 7 0.00000000947672
Rhododendron simsii chr05 4 CH_rsi_373 4 11 0.0000898872
Striga asiatica scaffold21 4 CH_sas_29 4 5 0.00000134579
Striga asiatica scaffold56 4 CH_sas_84 4 13 0.000190406
Salvia bowleyana GWHASIU00000003 4 CH_sbo_115 5 5 0.000000000517787
Salvia bowleyana GWHASIU00000003 4 CH_sbo_133 6 14 0.00000000241472
Salvia bowleyana GWHASIU00000007 4 CH_sbo_174 8 80 0.00000005039
Salvia bowleyana GWHASIU00000003 4 CH_sbo_397 3 3 0.000201289
Salvia bowleyana GWHASIU00000004 4 CH_sbo_398 3 3 0.000201289
Salix brachista GWHAAZH00000006 4 CH_sbr_152 4 4 0.000000688323
Salix brachista GWHAAZH00000014 4 CH_sbr_312 3 3 0.000326049
Simmondsia chinensis GWHAASQ00000008 4 CH_sci_177 4 10 0.000112715
Simmondsia chinensis GWHAASQ00000016 4 CH_sci_193 3 3 0.000254743
Simmondsia chinensis GWHAASQ00000023 4 CH_sci_73 4 4 0.000000542283
Sechium edule LG04 4 CH_sed_228 3 3 0.000365744
Sequoiadendron giganteum chr4 4 CH_sgi_26 17 24 1.79355e-35
Sequoiadendron giganteum chr8 4 CH_sgi_638 5 8 0.000000195871
Sequoiadendron giganteum chr7 4 CH_sgi_686 5 9 0.000000439832
Sequoiadendron giganteum chr2 4 CH_sgi_737 4 4 0.00000147398
Sequoiadendron giganteum chr4 4 CH_sgi_79 12 15 5.24668e-25
Sequoiadendron giganteum chr3 4 CH_sgi_826 5 14 0.00000691907
Solanum lycopersicum SL4.0ch01 4 CH_sly_116 5 5 0.00000000292017
Solanum lycopersicum SL4.0ch10 4 CH_sly_187 5 9 0.000000365027
Solanum lycopersicum SL4.0ch01 4 CH_sly_522 3 3 0.000510408
Solanum lycopersicum SL4.0ch11 4 CH_sly_523 3 3 0.000510408
Selaginella moellendorffii scaffold_1 4 CH_smo_111 3 4 0.0000805015
Schrenkiella parvula ch6-1 4 CH_spa_173 3 3 0.000334668
Schrenkiella parvula ch6-6 4 CH_spa_174 3 3 0.000334668
Solanum pennellii Spenn-ch01 4 CH_spe_320 3 3 0.000112236
Selenicereus undatus Scaffold_33679 4 CH_sun_225 3 7 0.000718841
Trochodendron aralioides group9 4 CH_tar_140 4 4 0.000000256459
Trochodendron aralioides group15 4 CH_tar_315 3 3 0.000158202
Theobroma cacao Chromosome_5 4 CH_tca_244 4 10 0.0000400853
Theobroma cacao Chromosome_9 4 CH_tca_63 6 8 0.0000000000124071
Tarenaya hassleriana NW_010965775.1 4 CH_tha_151 3 3 0.00041827
Tarenaya hassleriana NW_010971389.1 4 CH_tha_152 3 3 0.00041827
Trifolium pratense Tp57577_TGAC_v2_LG6 4 CH_tpr_117 4 4 0.00000176116
Trifolium pratense Tp57577_TGAC_v2_LG2 4 CH_tpr_150 4 5 0.000008786
Trifolium pratense Tp57577_TGAC_v2_LG5 4 CH_tpr_151 4 5 0.000008786
Trifolium pratense Tp57577_TGAC_v2_LG1 4 CH_tpr_176 4 6 0.0000262987
Trifolium pratense Tp57577_TGAC_v2_scaf_361 4 CH_tpr_177 4 6 0.0000262987
Tripterygium wilfordii NC_052249.1 4 CH_twi_255 3 3 0.000185394
Tripterygium wilfordii NC_052254.1 4 CH_twi_256 3 3 0.000185394
Tripterygium wilfordii NC_052240.1 4 CH_twi_317 3 4 0.000740625
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_325 3 3 0.000399674
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_326 3 3 0.000399674
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_63 6 9 0.0000000005269
Vigna mungo CM024078.1 4 CH_vmu_189 4 8 0.0000647106
Vigna mungo CM024075.1 4 CH_vmu_287 3 3 0.000405972
Vigna mungo CM024072.1 4 CH_vmu_74 5 7 0.0000000440649
Vigna mungo CM024073.1 4 CH_vmu_96 5 9 0.000000263391
Vanilla planifolia CM028153.1 4 CH_vpl_330 3 3 0.000575719
Vitis vinifera chr6 4 CH_vvi_184 4 5 0.0000015182
Zea mays 5 4 CH_zma_53 5 6 0.00000000088187

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001