Functional clusters
Information
- Type Gene Ontology
- Description pyridoxal phosphate binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | C03 | 3 | CH_bna_109 | 6 | 7 | 0.000000000521078 |
| Brassica oleracea | C3 | 3 | CH_bol_54 | 7 | 13 | 0.0000000000904218 |
| Capsicum annuum | PGAv.1.6.scaffold209 | 3 | CH_can_125 | 5 | 5 | 0.00000000839933 |
| Corylus avellana | 5 | 3 | CH_cav_193 | 4 | 5 | 0.000013655 |
| Ceratophyllum demersum | 9 | 3 | CH_cde_71 | 4 | 4 | 0.00000706588 |
| Cardamine hirsuta | Chr5 | 3 | CH_chi_88 | 5 | 5 | 0.00000000528618 |
| Lotus japonicus | chr5 | 3 | CH_lja_209 | 4 | 6 | 0.0000591194 |
| Manihot esculenta | Chromosome01 | 3 | CH_mes_440 | 3 | 3 | 0.000932111 |
| Medicago truncatula | chr1 | 3 | CH_mtr_434 | 4 | 6 | 0.0000148703 |
| Medicago truncatula | chr3 | 3 | CH_mtr_696 | 3 | 3 | 0.000474683 |
| Petunia axillaris | Peaxi162Scf00024 | 3 | CH_pax_14 | 9 | 13 | 7.80875e-16 |
| Physcomitrium patens | scaffold_30 | 3 | CH_ppa_192 | 5 | 26 | 0.000540314 |
| Papaver somniferum | NC_039364.1 | 3 | CH_pso_200 | 7 | 23 | 0.00000000963716 |
| Papaver somniferum | NC_039367.1 | 3 | CH_pso_282 | 5 | 8 | 0.00000040227 |
| Sechium edule | LG11 | 3 | CH_sed_130 | 4 | 4 | 0.00000500937 |
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_1253 | 3 | 3 | 0.000432466 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_558 | 5 | 7 | 0.0000000411108 |
| Sapria himalayana | scaffold9_16683904 | 3 | CH_shi_136 | 3 | 3 | 0.0000448226 |
| Solanum lycopersicum | SL4.0ch08 | 3 | CH_sly_71 | 7 | 8 | 0.00000000000216899 |
| Solanum pennellii | Spenn-ch08 | 3 | CH_spe_131 | 6 | 15 | 0.000000048632 |
| Solanum pennellii | Spenn-ch08 | 3 | CH_spe_38 | 7 | 8 | 0.000000000000188073 |
| Theobroma cacao | Chromosome_2 | 3 | CH_tca_256 | 4 | 7 | 0.0000554634 |
| Brassica napus | C03 | 4 | CH_bna_109 | 6 | 7 | 0.000000000521078 |
| Brassica oleracea | C3 | 4 | CH_bol_54 | 7 | 13 | 0.0000000000904218 |
| Capsicum annuum | PGAv.1.6.scaffold209 | 4 | CH_can_125 | 5 | 5 | 0.00000000839933 |
| Corylus avellana | 5 | 4 | CH_cav_193 | 4 | 5 | 0.000013655 |
| Ceratophyllum demersum | 9 | 4 | CH_cde_71 | 4 | 4 | 0.00000706588 |
| Cardamine hirsuta | Chr5 | 4 | CH_chi_88 | 5 | 5 | 0.00000000528618 |
| Lotus japonicus | chr5 | 4 | CH_lja_209 | 4 | 6 | 0.0000591194 |
| Manihot esculenta | Chromosome01 | 4 | CH_mes_440 | 3 | 3 | 0.000932111 |
| Medicago truncatula | chr1 | 4 | CH_mtr_434 | 4 | 6 | 0.0000148703 |
| Medicago truncatula | chr3 | 4 | CH_mtr_696 | 3 | 3 | 0.000474683 |
| Petunia axillaris | Peaxi162Scf00024 | 4 | CH_pax_14 | 9 | 13 | 7.80875e-16 |
| Physcomitrium patens | scaffold_30 | 4 | CH_ppa_192 | 5 | 26 | 0.000540314 |
| Papaver somniferum | NC_039364.1 | 4 | CH_pso_200 | 7 | 23 | 0.00000000963716 |
| Papaver somniferum | NC_039367.1 | 4 | CH_pso_282 | 5 | 8 | 0.00000040227 |
| Sechium edule | LG11 | 4 | CH_sed_130 | 4 | 4 | 0.00000500937 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_1253 | 3 | 3 | 0.000432466 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_558 | 5 | 7 | 0.0000000411108 |
| Sapria himalayana | scaffold9_16683904 | 4 | CH_shi_136 | 3 | 3 | 0.0000448226 |
| Solanum lycopersicum | SL4.0ch08 | 4 | CH_sly_71 | 7 | 8 | 0.00000000000216899 |
| Solanum pennellii | Spenn-ch08 | 4 | CH_spe_131 | 6 | 15 | 0.000000048632 |
| Solanum pennellii | Spenn-ch08 | 4 | CH_spe_38 | 7 | 8 | 0.000000000000188073 |
| Theobroma cacao | Chromosome_2 | 4 | CH_tca_256 | 4 | 7 | 0.0000554634 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |