Functional clusters

Information

  • Type Gene Ontology
  • Description manganese ion binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_362 3 CH_aag_17 8 13 0.00000000000187618
Anthoceros agrestis Sc2ySwM_117 3 CH_aag_4 15 51 3.63657e-20
Anthoceros agrestis Sc2ySwM_117 3 CH_aag_51 5 6 0.000000155031
Acer truncatum chr3 3 CH_acertr_104 5 7 0.0000000250923
Acer truncatum chr2 3 CH_acertr_3 16 34 1.98164e-30
Acer truncatum chr6 3 CH_acertr_49 6 7 0.0000000000168357
Actinidia chinensis Lachesis_group11 3 CH_ach_84 4 7 0.00000491268
Arabidopsis lyrata scaffold_3 3 CH_aly_196 4 10 0.0000568337
Arabidopsis lyrata scaffold_7 3 CH_aly_8 11 24 1.43872e-20
Avicennia marina ScioBoG_4119_HRSCAF_4138 3 CH_ama_18 4 4 0.000000113287
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 3 CH_amhyb_23 6 7 0.000000000033269
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 3 CH_amhyb_74 4 5 0.00000435465
Aquilegia oxysepala CHR02 3 CH_aox_32 5 6 0.000000000374618
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 3 CH_arhy_467 3 3 0.0000615232
Arabidopsis thaliana Chr3 3 CH_ath_127 5 12 0.0000000166823
Arabidopsis thaliana Chr5 3 CH_ath_26 11 73 9.18084e-18
Amborella trichopoda AmTr_v1.0_scaffold00089 3 CH_atr_39 7 12 0.00000000000114646
Amborella trichopoda AmTr_v1.0_scaffold00121 3 CH_atr_68 5 6 0.00000000306502
Brassica carinata ChrB06 3 CH_bca_219 5 10 0.0000000883845
Brassica carinata ChrC07 3 CH_bca_272 4 4 0.000000274917
Brassica carinata ChrC09 3 CH_bca_974 3 4 0.000849445
Brassica napus C04 3 CH_bna_687 3 4 0.000964825
Brassica oleracea C2 3 CH_bol_119 4 4 0.000000134416
Brassica oleracea C8 3 CH_bol_348 3 4 0.000450241
Beta vulgaris Chr8_EL10_PGA_scaffold4 3 CH_bvu_10 14 40 1.77938e-20
Beta vulgaris Chr1_EL10_PGA_scaffold3 3 CH_bvu_24 8 10 0.0000000000000291432
Beta vulgaris Chr2_EL10_PGA_scaffold6 3 CH_bvu_42 7 11 0.0000000000225448
Beta vulgaris Chr7_EL10_PGA_scaffold5 3 CH_bvu_9 11 14 8.8677e-21
Camellia sinensis var. sinensis Chr1 3 CH_camsi_29 10 14 7.94526e-20
Camellia sinensis var. sinensis Chr5 3 CH_camsi_385 5 14 0.00000421068
Camellia sinensis var. sinensis Chr6 3 CH_camsi_390 4 5 0.00000500271
Cannabis sativa NC_044378.1 3 CH_cansat_112 5 11 0.000000109529
Cannabis sativa NC_044375.1 3 CH_cansat_243 3 3 0.000111869
Cannabis sativa NC_044375.1 3 CH_cansat_64 6 10 0.000000000070465
Capsicum annuum PGAv.1.6.scaffold855 3 CH_can_228 4 6 0.00000492232
Capsicum annuum PGAv.1.6.scaffold1161 3 CH_can_246 5 21 0.000011881
Capsicum annuum PGAv.1.6.scaffold793 3 CH_can_280 4 10 0.0000685013
Capsicum annuum PGAv.1.6.scaffold1379 3 CH_can_349 3 3 0.000177062
Cicer arietinum L. Ca_LG7_v3 3 CH_car_30 4 4 0.0000000833234
Corylus avellana 1 3 CH_cav_3 18 31 1.86083e-35
Corylus avellana 2 3 CH_cav_9 15 32 6.02235e-27
Citrus clementina scaffold_3 3 CH_ccl_35 9 14 2.13313e-16
Carpinus fangiana Cfa08 3 CH_cfa_234 3 3 0.0000850068
Carpinus fangiana Cfa01 3 CH_cfa_61 6 12 0.000000000197543
Cardamine hirsuta Chr8 3 CH_chi_21 11 39 9.4779e-18
Cardamine hirsuta Chr3 3 CH_chi_69 5 5 0.000000000445017
Carya illinoinensis Chr05 3 CH_cil_11 14 21 2.19997e-27
Carya illinoinensis Chr08 3 CH_cil_32 10 11 6.0154e-21
Carya illinoinensis Chr10 3 CH_cil_507 3 3 0.000677036
Carya illinoinensis Chr04 3 CH_cil_508 3 3 0.000677036
Carya illinoinensis Chr12 3 CH_cil_94 7 9 0.00000000000119619
Cucumis melo chr08 3 CH_cme_21 7 8 0.00000000000000149729
Carica papaya supercontig_51 3 CH_cpa_2 10 10 8.63305e-24
Chenopodium quinoa C_Quinoa_Scaffold_4329 3 CH_cqu_1 28 37 1.69265e-57
Chenopodium quinoa C_Quinoa_Scaffold_3356 3 CH_cqu_196 7 32 0.000000941812
Chenopodium quinoa C_Quinoa_Scaffold_1765 3 CH_cqu_257 4 4 0.00000700468
Chenopodium quinoa C_Quinoa_Scaffold_3100 3 CH_cqu_258 4 4 0.00000700468
Chenopodium quinoa C_Quinoa_Scaffold_2947 3 CH_cqu_259 4 4 0.00000700468
Chenopodium quinoa C_Quinoa_Scaffold_2412 3 CH_cqu_7 16 22 1.22164e-30
Chenopodium quinoa C_Quinoa_Scaffold_1522 3 CH_cqu_79 6 6 0.0000000000867116
Chenopodium quinoa C_Quinoa_Scaffold_1566 3 CH_cqu_80 6 6 0.0000000000867116
Capsella rubella scaffold_7 3 CH_cru_30 8 20 0.000000000000113991
Cucumis sativus L. chr6 3 CH_csa_26 7 8 0.0000000000000096654
Davidia involucrata GWHABJS00000008 3 CH_din_10 12 17 1.66933e-24
Davidia involucrata GWHABJS00000013 3 CH_din_148 4 4 0.000000916366
Davidia involucrata GWHABJS00000007 3 CH_din_3 15 25 6.0054e-30
Durio zibethinus NW_019168004.1 3 CH_dzi_1 16 18 4.94026e-38
Durio zibethinus NW_019168481.1 3 CH_dzi_3 15 27 3.50758e-30
Durio zibethinus NW_019168492.1 3 CH_dzi_42 6 6 0.00000000000181692
Erigeron canadensis Conyza_canadensis_scaffold:5 3 CH_eca_11 12 76 9.03852e-18
Erigeron canadensis Conyza_canadensis_scaffold:5 3 CH_eca_164 4 6 0.00000172169
Erigeron canadensis Conyza_canadensis_scaffold:3 3 CH_eca_65 5 6 0.000000000835232
Eucalyptus grandis Chr07 3 CH_egr_140 9 11 6.37805e-17
Eucalyptus grandis Chr08 3 CH_egr_3 25 35 3.37733e-51
Eucalyptus grandis Chr02 3 CH_egr_337 6 8 0.00000000108752
Eucalyptus grandis Chr03 3 CH_egr_392 5 5 0.0000000123547
Eucalyptus grandis Chr04 3 CH_egr_569 4 4 0.00000387292
Eucalyptus grandis Chr03 3 CH_egr_59 11 11 1.07024e-23
Eucalyptus grandis Chr05 3 CH_egr_618 4 5 0.0000193146
Erythranthe guttata scaffold_8 3 CH_egut_118 5 5 0.00000000316746
Erythranthe guttata scaffold_14 3 CH_egut_237 7 72 0.0000245241
Erythranthe guttata scaffold_14 3 CH_egut_391 3 3 0.00049466
Eutrema salsugineum scaffold_14 3 CH_esa_3 12 24 1.62851e-23
Fragaria x ananassa Fvb3-1 3 CH_fan_17 10 30 5.02623e-16
Fragaria x ananassa Fvb3-4 3 CH_fan_22 8 12 0.00000000000000321574
Fragaria x ananassa Fvb1-4 3 CH_fan_243 4 5 0.00000438629
Fragaria x ananassa Fvb3-2 3 CH_fan_282 4 6 0.0000131412
Fragaria x ananassa Fvb1-2 3 CH_fan_489 3 3 0.000524563
Fragaria vesca Fvb1 3 CH_fve_105 5 7 0.00000000722848
Gossypium hirsutum D11 3 CH_ghi_4 19 23 1.41111e-43
Gossypium hirsutum A11 3 CH_ghi_6 17 20 5.64097e-39
Gossypium hirsutum D13 3 CH_ghi_85 8 16 0.000000000000226806
Glycine max Gm16 3 CH_gma_108 5 6 0.00000000433776
Glycine max Gm07 3 CH_gma_109 5 6 0.00000000433776
Glycine max Gm19 3 CH_gma_126 5 7 0.0000000151612
Glycine max Gm19 3 CH_gma_87 5 5 0.000000000723958
Gossypium raimondii Chr13 3 CH_gra_101 5 6 0.0000000107753
Gossypium raimondii Chr13 3 CH_gra_47 8 16 0.000000000000200704
Gossypium raimondii Chr07 3 CH_gra_6 16 20 1.38358e-35
Helianthus annuus HanXRQChr13 3 CH_han_103 7 14 0.00000000000370357
Helianthus annuus HanXRQChr10 3 CH_han_34 10 19 3.02635e-19
Helianthus annuus HanXRQChr06 3 CH_han_414 4 8 0.0000221591
Helianthus annuus HanXRQChr06 3 CH_han_566 3 3 0.000205809
Hydrangea macrophylla Hma1.2p1_0057F.1 3 CH_hma_2 15 19 4.3814e-35
Lupinus albus Lalb_Chr04 3 CH_lal_104 5 9 0.0000000589119
Lupinus albus Lalb_Chr25 3 CH_lal_178 4 6 0.00000439306
Lupinus albus Lalb_Chr05 3 CH_lal_26 7 7 0.00000000000000114613
Lotus japonicus chr6 3 CH_lja_136 4 5 0.00000126155
Lotus japonicus chr3 3 CH_lja_137 4 5 0.00000126155
Lonicera japonica GWHAAZE00000134 3 CH_lonja_105 8 14 0.000000000000287072
Lonicera japonica GWHAAZE00000001 3 CH_lonja_190 5 5 0.00000000529642
Lonicera japonica GWHAAZE00000002 3 CH_lonja_24 18 49 7.81933e-30
Lonicera japonica GWHAAZE00000002 3 CH_lonja_53 11 20 2.63077e-19
Lonicera japonica GWHAAZE00000003 3 CH_lonja_576 3 3 0.000721145
Lonicera japonica GWHAAZE00000001 3 CH_lonja_96 12 72 0.000000000000068649
Lactuca sativa Lsat_1_v8_lg_9 3 CH_lsa_27 9 12 7.46219e-19
Magnolia biondii Chr17 3 CH_mbi_215 5 11 0.000000184772
Magnolia biondii Chr06 3 CH_mbi_225 5 12 0.000000316346
Magnolia biondii Chr02 3 CH_mbi_246 6 32 0.000000531697
Malus domestica Chr11 3 CH_mdo_193 6 24 0.0000000468552
Malus domestica Chr10 3 CH_mdo_276 4 5 0.000000993166
Malus domestica Chr10 3 CH_mdo_412 4 10 0.0000414849
Manihot esculenta Chromosome08 3 CH_mes_1 30 30 3.94036e-76
Manihot esculenta Chromosome17 3 CH_mes_136 5 5 0.00000000363215
Manihot esculenta Chromosome01 3 CH_mes_394 3 3 0.000572411
Marchantia polymorpha scaffold_180 3 CH_mpo_37 8 30 0.0000000731871
Marchantia polymorpha scaffold_10 3 CH_mpo_5 10 13 1.04288e-16
Marchantia polymorpha scaffold_193 3 CH_mpo_6 11 19 1.36854e-16
Marchantia polymorpha scaffold_85 3 CH_mpo_61 4 4 0.0000171769
Marchantia polymorpha scaffold_31 3 CH_mpo_8 11 23 0.0000000000000024028
Medicago truncatula chr6 3 CH_mtr_122 6 7 0.0000000000059778
Medicago truncatula chr2 3 CH_mtr_295 5 10 0.0000001371
Medicago truncatula chr8 3 CH_mtr_53 9 17 7.22586e-17
Medicago truncatula chr4 3 CH_mtr_599 3 3 0.000216046
Medicago truncatula chr2 3 CH_mtr_600 3 3 0.000216046
Medicago truncatula chr2 3 CH_mtr_601 3 3 0.000216046
Medicago truncatula chr3 3 CH_mtr_761 3 4 0.000863126
Nicotiana tabacum Nitab4.5_0000081 3 CH_nta_107 3 4 0.000211095
Nicotiana tabacum Nitab4.5_0000044 3 CH_nta_7 5 5 0.0000000000878008
Olea europaea chr21 3 CH_oeu_41 5 8 0.00000000466158
Oryza sativa ssp. japonica chr03 3 CH_osa_159 4 4 0.000000359906
Oryza sativa ssp. japonica chr12 3 CH_osa_160 4 4 0.000000359906
Oryza sativa ssp. japonica chr09 3 CH_osa_372 3 3 0.000209676
Oryza sativa ssp. japonica chr08 3 CH_osa_6 11 11 1.0099e-26
Petunia axillaris Peaxi162Scf00409 3 CH_pax_23 7 10 0.000000000000793978
Petunia axillaris Peaxi162Scf00194 3 CH_pax_24 7 10 0.000000000000793978
Petunia axillaris Peaxi162Scf00040 3 CH_pax_279 3 3 0.00032433
Punica granatum NC_045134.1 3 CH_pgr_103 5 5 0.00000000287821
Punica granatum NC_045134.1 3 CH_pgr_140 5 8 0.000000160181
Punica granatum NC_045128.1 3 CH_pgr_15 9 10 9.25434e-19
Punica granatum NC_045128.1 3 CH_pgr_200 4 5 0.00000579943
Punica granatum NC_045131.1 3 CH_pgr_80 6 8 0.000000000195738
Physcomitrium patens Chr23 3 CH_ppa_3 8 10 4.32675e-16
Prunus persica Pp05 3 CH_ppe_267 4 6 0.0000118264
Prunus persica Pp07 3 CH_ppe_407 3 3 0.000347778
Prunus persica Pp04 3 CH_ppe_50 8 10 8.04012e-16
Prunus persica Pp06 3 CH_ppe_96 6 6 0.000000000003898
Pisum sativum chr1LG6 3 CH_psa_246 3 3 0.0000705962
Pisum sativum chr1LG6 3 CH_psa_247 3 3 0.0000705962
Pisum sativum chr7LG7 3 CH_psa_260 4 16 0.000149108
Papaver somniferum NC_039359.1 3 CH_pso_119 6 8 0.0000000000342203
Papaver somniferum NC_039359.1 3 CH_pso_139 7 21 0.000000000211139
Papaver somniferum NW_020619603.1 3 CH_pso_16 11 14 3.2294e-24
Papaver somniferum NC_039359.1 3 CH_pso_168 6 12 0.00000000112338
Papaver somniferum NC_039359.1 3 CH_pso_292 4 4 0.000000525914
Papaver somniferum NW_020625264.1 3 CH_pso_31 9 11 2.26065e-19
Papaver somniferum NC_039362.1 3 CH_pso_451 4 9 0.0000658564
Papaver somniferum NC_039364.1 3 CH_pso_47 8 10 1.24383e-16
Papaver somniferum NC_039359.1 3 CH_pso_596 3 3 0.000340773
Populus trichocarpa Chr13 3 CH_ptr_124 6 8 0.000000000269833
Populus trichocarpa Chr04 3 CH_ptr_35 10 13 9.32948e-20
Populus trichocarpa Chr10 3 CH_ptr_351 5 24 0.000159013
Populus trichocarpa Chr13 3 CH_ptr_45 8 8 5.77335e-17
Populus trichocarpa Chr19 3 CH_ptr_89 7 10 0.00000000000283496
Phaseolus vulgaris Chr10 3 CH_pvu_125 4 4 0.00000019419
Phaseolus vulgaris Chr08 3 CH_pvu_29 8 9 8.54561e-18
Quercus lobata 1 3 CH_qlo_168 7 7 0.0000000000000416024
Quercus lobata 10 3 CH_qlo_257 8 24 0.0000000000768759
Quercus lobata 5 3 CH_qlo_342 6 11 0.0000000072157
Quercus lobata 11 3 CH_qlo_397 5 6 0.0000000355657
Quercus lobata 5 3 CH_qlo_69 10 11 7.85742e-21
Quercus lobata CM012294 3 CH_qlo_760 4 7 0.000076941
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_193 5 6 0.00000000195954
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_59 8 9 7.64741e-18
Rhododendron simsii chr03 3 CH_rsi_229 4 4 0.000000480247
Rhododendron simsii chr11 3 CH_rsi_3 25 36 3.67449e-57
Salvia bowleyana GWHASIU00000002 3 CH_sbo_237 5 16 0.00000180256
Salvia bowleyana GWHASIU00000002 3 CH_sbo_8 18 44 2.33296e-35
Salix brachista GWHAAZH00000010 3 CH_sbr_220 3 3 0.0000389842
Simmondsia chinensis GWHAASQ00000013 3 CH_sci_26 5 5 0.000000000335367
Sechium edule LG08 3 CH_sed_70 5 8 0.0000000185605
Sequoiadendron giganteum chr3 3 CH_sgi_146 14 65 3.77859e-18
Sequoiadendron giganteum chr1 3 CH_sgi_164 8 8 1.8463e-16
Sequoiadendron giganteum chr6 3 CH_sgi_374 9 38 0.0000000000770963
Sequoiadendron giganteum chr3 3 CH_sgi_58 12 12 1.0051e-26
Sequoiadendron giganteum chr1 3 CH_sgi_633 5 7 0.000000175522
Sequoiadendron giganteum chr8 3 CH_sgi_719 5 9 0.00000104813
Sequoiadendron giganteum chr3 3 CH_sgi_774 4 4 0.00000294665
Sequoiadendron giganteum chr7 3 CH_sgi_873 4 5 0.0000146993
Solanum lycopersicum SL4.0ch09 3 CH_sly_112 5 6 0.00000000153101
Solanum lycopersicum SL4.0ch11 3 CH_sly_168 4 4 0.000000177644
Solanum lycopersicum SL4.0ch01 3 CH_sly_215 4 5 0.000000887171
Selaginella moellendorffii scaffold_27 3 CH_smo_49 5 9 0.00000050035
Selaginella moellendorffii scaffold_40 3 CH_smo_84 4 6 0.0000217245
Schrenkiella parvula ch7-1 3 CH_spa_19 7 23 0.000000000121697
Solanum pennellii Spenn-ch11 3 CH_spe_134 4 4 0.0000000714735
Solanum pennellii Spenn-ch01 3 CH_spe_182 6 50 0.0000012183
Solanum pennellii Spenn-ch01 3 CH_spe_34 6 6 0.0000000000000797632
Solanum pennellii Spenn-ch09 3 CH_spe_373 3 4 0.000262119
Solanum tuberosum ST4.03ch01 3 CH_stu_20 11 17 3.04354e-23
Solanum tuberosum ST4.03ch11 3 CH_stu_212 4 4 0.000000225232
Solanum tuberosum ST4.03ch10 3 CH_stu_256 4 5 0.00000112479
Solanum tuberosum ST4.03ch09 3 CH_stu_257 4 5 0.00000112479
Solanum tuberosum ST4.03ch01 3 CH_stu_41 8 10 4.43914e-17
Selenicereus undatus Scaffold_33676 3 CH_sun_6 10 16 4.69184e-21
Trochodendron aralioides group6 3 CH_tar_148 6 21 0.000000375546
Trochodendron aralioides group13 3 CH_tar_175 4 4 0.00000125272
Trochodendron aralioides group3 3 CH_tar_189 5 12 0.00000234957
Trochodendron aralioides group13 3 CH_tar_211 4 5 0.00000625138
Trochodendron aralioides group9 3 CH_tar_424 3 3 0.000515177
Trochodendron aralioides group18 3 CH_tar_45 7 13 0.0000000000283233
Theobroma cacao Chromosome_5 3 CH_tca_3 20 25 5.21286e-47
Tarenaya hassleriana NW_010961290.1 3 CH_tha_96 3 3 0.0000522517
Trifolium pratense Tp57577_TGAC_v2_LG7 3 CH_tpr_237 3 3 0.000106077
Trifolium pratense Tp57577_TGAC_v2_LG5 3 CH_tpr_238 3 3 0.000106077
Trifolium pratense Tp57577_TGAC_v2_LG7 3 CH_tpr_314 3 4 0.000423808
Trifolium pratense Tp57577_TGAC_v2_LG2 3 CH_tpr_47 5 6 0.00000000142083
Tripterygium wilfordii NC_052235.1 3 CH_twi_127 4 4 0.000000668341
Tripterygium wilfordii NC_052235.1 3 CH_twi_5 14 20 1.42631e-29
Tripterygium wilfordii NC_052246.1 3 CH_twi_60 5 5 0.00000000134239
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_38 6 7 0.00000000000571854
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_5 9 9 3.51832e-21
Vanilla planifolia CM028150.1 3 CH_vpl_18 6 6 0.000000000000302196
Vanilla planifolia CM028157.1 3 CH_vpl_228 3 3 0.000101066
Vitis vinifera chr14 3 CH_vvi_13 16 40 2.67352e-29
Vitis vinifera chr14 3 CH_vvi_342 3 3 0.000240573
Zea mays 4 3 CH_zma_1 18 18 2.58423e-44
Zea mays 10 3 CH_zma_108 5 9 0.000000298201
Anthoceros agrestis Sc2ySwM_362 4 CH_aag_17 8 13 0.00000000000187618
Anthoceros agrestis Sc2ySwM_117 4 CH_aag_4 15 51 3.63657e-20
Anthoceros agrestis Sc2ySwM_117 4 CH_aag_51 5 6 0.000000155031
Acer truncatum chr3 4 CH_acertr_104 5 7 0.0000000250923
Acer truncatum chr2 4 CH_acertr_3 16 34 1.98164e-30
Acer truncatum chr6 4 CH_acertr_49 6 7 0.0000000000168357
Actinidia chinensis Lachesis_group11 4 CH_ach_84 4 7 0.00000491268
Arabidopsis lyrata scaffold_3 4 CH_aly_196 4 10 0.0000568337
Arabidopsis lyrata scaffold_7 4 CH_aly_8 11 24 1.43872e-20
Avicennia marina ScioBoG_4119_HRSCAF_4138 4 CH_ama_18 4 4 0.000000113287
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 4 CH_amhyb_23 6 7 0.000000000033269
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 4 CH_amhyb_74 4 5 0.00000435465
Aquilegia oxysepala CHR02 4 CH_aox_32 5 6 0.000000000374618
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 4 CH_arhy_467 3 3 0.0000615232
Arabidopsis thaliana Chr3 4 CH_ath_127 5 12 0.0000000166823
Arabidopsis thaliana Chr5 4 CH_ath_26 11 73 9.18084e-18
Amborella trichopoda AmTr_v1.0_scaffold00089 4 CH_atr_39 7 12 0.00000000000114646
Amborella trichopoda AmTr_v1.0_scaffold00121 4 CH_atr_68 5 6 0.00000000306502
Brassica carinata ChrB06 4 CH_bca_219 5 10 0.0000000883845
Brassica carinata ChrC07 4 CH_bca_272 4 4 0.000000274917
Brassica carinata ChrC09 4 CH_bca_974 3 4 0.000849445
Brassica napus C04 4 CH_bna_687 3 4 0.000964825
Brassica oleracea C2 4 CH_bol_119 4 4 0.000000134416
Brassica oleracea C8 4 CH_bol_348 3 4 0.000450241
Beta vulgaris Chr8_EL10_PGA_scaffold4 4 CH_bvu_10 14 40 1.77938e-20
Beta vulgaris Chr1_EL10_PGA_scaffold3 4 CH_bvu_24 8 10 0.0000000000000291432
Beta vulgaris Chr2_EL10_PGA_scaffold6 4 CH_bvu_42 7 11 0.0000000000225448
Beta vulgaris Chr7_EL10_PGA_scaffold5 4 CH_bvu_9 11 14 8.8677e-21
Camellia sinensis var. sinensis Chr1 4 CH_camsi_29 10 14 7.94526e-20
Camellia sinensis var. sinensis Chr5 4 CH_camsi_385 5 14 0.00000421068
Camellia sinensis var. sinensis Chr6 4 CH_camsi_390 4 5 0.00000500271
Cannabis sativa NC_044378.1 4 CH_cansat_112 5 11 0.000000109529
Cannabis sativa NC_044375.1 4 CH_cansat_243 3 3 0.000111869
Cannabis sativa NC_044375.1 4 CH_cansat_64 6 10 0.000000000070465
Capsicum annuum PGAv.1.6.scaffold855 4 CH_can_228 4 6 0.00000492232
Capsicum annuum PGAv.1.6.scaffold1161 4 CH_can_246 5 21 0.000011881
Capsicum annuum PGAv.1.6.scaffold793 4 CH_can_280 4 10 0.0000685013
Capsicum annuum PGAv.1.6.scaffold1379 4 CH_can_349 3 3 0.000177062
Cicer arietinum L. Ca_LG7_v3 4 CH_car_30 4 4 0.0000000833234
Corylus avellana 1 4 CH_cav_3 18 31 1.86083e-35
Corylus avellana 2 4 CH_cav_9 15 32 6.02235e-27
Citrus clementina scaffold_3 4 CH_ccl_35 9 14 2.13313e-16
Carpinus fangiana Cfa08 4 CH_cfa_234 3 3 0.0000850068
Carpinus fangiana Cfa01 4 CH_cfa_61 6 12 0.000000000197543
Cardamine hirsuta Chr8 4 CH_chi_21 11 39 9.4779e-18
Cardamine hirsuta Chr3 4 CH_chi_69 5 5 0.000000000445017
Carya illinoinensis Chr05 4 CH_cil_11 14 21 2.19997e-27
Carya illinoinensis Chr08 4 CH_cil_32 10 11 6.0154e-21
Carya illinoinensis Chr10 4 CH_cil_507 3 3 0.000677036
Carya illinoinensis Chr04 4 CH_cil_508 3 3 0.000677036
Carya illinoinensis Chr12 4 CH_cil_94 7 9 0.00000000000119619
Cucumis melo chr08 4 CH_cme_21 7 8 0.00000000000000149729
Carica papaya supercontig_51 4 CH_cpa_2 10 10 8.63305e-24
Chenopodium quinoa C_Quinoa_Scaffold_4329 4 CH_cqu_1 28 37 1.69265e-57
Chenopodium quinoa C_Quinoa_Scaffold_3356 4 CH_cqu_196 7 32 0.000000941812
Chenopodium quinoa C_Quinoa_Scaffold_1765 4 CH_cqu_257 4 4 0.00000700468
Chenopodium quinoa C_Quinoa_Scaffold_3100 4 CH_cqu_258 4 4 0.00000700468
Chenopodium quinoa C_Quinoa_Scaffold_2947 4 CH_cqu_259 4 4 0.00000700468
Chenopodium quinoa C_Quinoa_Scaffold_2412 4 CH_cqu_7 16 22 1.22164e-30
Chenopodium quinoa C_Quinoa_Scaffold_1522 4 CH_cqu_79 6 6 0.0000000000867116
Chenopodium quinoa C_Quinoa_Scaffold_1566 4 CH_cqu_80 6 6 0.0000000000867116
Capsella rubella scaffold_7 4 CH_cru_30 8 20 0.000000000000113991
Cucumis sativus L. chr6 4 CH_csa_26 7 8 0.0000000000000096654
Davidia involucrata GWHABJS00000008 4 CH_din_10 12 17 1.66933e-24
Davidia involucrata GWHABJS00000013 4 CH_din_148 4 4 0.000000916366
Davidia involucrata GWHABJS00000007 4 CH_din_3 15 25 6.0054e-30
Durio zibethinus NW_019168004.1 4 CH_dzi_1 16 18 4.94026e-38
Durio zibethinus NW_019168481.1 4 CH_dzi_3 15 27 3.50758e-30
Durio zibethinus NW_019168492.1 4 CH_dzi_42 6 6 0.00000000000181692
Erigeron canadensis Conyza_canadensis_scaffold:5 4 CH_eca_11 12 76 9.03852e-18
Erigeron canadensis Conyza_canadensis_scaffold:5 4 CH_eca_164 4 6 0.00000172169
Erigeron canadensis Conyza_canadensis_scaffold:3 4 CH_eca_65 5 6 0.000000000835232
Eucalyptus grandis Chr07 4 CH_egr_140 9 11 6.37805e-17
Eucalyptus grandis Chr08 4 CH_egr_3 25 35 3.37733e-51
Eucalyptus grandis Chr02 4 CH_egr_337 6 8 0.00000000108752
Eucalyptus grandis Chr03 4 CH_egr_392 5 5 0.0000000123547
Eucalyptus grandis Chr04 4 CH_egr_569 4 4 0.00000387292
Eucalyptus grandis Chr03 4 CH_egr_59 11 11 1.07024e-23
Eucalyptus grandis Chr05 4 CH_egr_618 4 5 0.0000193146
Erythranthe guttata scaffold_8 4 CH_egut_118 5 5 0.00000000316746
Erythranthe guttata scaffold_14 4 CH_egut_237 7 72 0.0000245241
Erythranthe guttata scaffold_14 4 CH_egut_391 3 3 0.00049466
Eutrema salsugineum scaffold_14 4 CH_esa_3 12 24 1.62851e-23
Fragaria x ananassa Fvb3-1 4 CH_fan_17 10 30 5.02623e-16
Fragaria x ananassa Fvb3-4 4 CH_fan_22 8 12 0.00000000000000321574
Fragaria x ananassa Fvb1-4 4 CH_fan_243 4 5 0.00000438629
Fragaria x ananassa Fvb3-2 4 CH_fan_282 4 6 0.0000131412
Fragaria x ananassa Fvb1-2 4 CH_fan_489 3 3 0.000524563
Fragaria vesca Fvb1 4 CH_fve_105 5 7 0.00000000722848
Gossypium hirsutum D11 4 CH_ghi_4 19 23 1.41111e-43
Gossypium hirsutum A11 4 CH_ghi_6 17 20 5.64097e-39
Gossypium hirsutum D13 4 CH_ghi_85 8 16 0.000000000000226806
Glycine max Gm16 4 CH_gma_108 5 6 0.00000000433776
Glycine max Gm07 4 CH_gma_109 5 6 0.00000000433776
Glycine max Gm19 4 CH_gma_126 5 7 0.0000000151612
Glycine max Gm19 4 CH_gma_87 5 5 0.000000000723958
Gossypium raimondii Chr13 4 CH_gra_101 5 6 0.0000000107753
Gossypium raimondii Chr13 4 CH_gra_47 8 16 0.000000000000200704
Gossypium raimondii Chr07 4 CH_gra_6 16 20 1.38358e-35
Helianthus annuus HanXRQChr13 4 CH_han_103 7 14 0.00000000000370357
Helianthus annuus HanXRQChr10 4 CH_han_34 10 19 3.02635e-19
Helianthus annuus HanXRQChr06 4 CH_han_414 4 8 0.0000221591
Helianthus annuus HanXRQChr06 4 CH_han_566 3 3 0.000205809
Hydrangea macrophylla Hma1.2p1_0057F.1 4 CH_hma_2 15 19 4.3814e-35
Lupinus albus Lalb_Chr04 4 CH_lal_104 5 9 0.0000000589119
Lupinus albus Lalb_Chr25 4 CH_lal_178 4 6 0.00000439306
Lupinus albus Lalb_Chr05 4 CH_lal_26 7 7 0.00000000000000114613
Lotus japonicus chr6 4 CH_lja_136 4 5 0.00000126155
Lotus japonicus chr3 4 CH_lja_137 4 5 0.00000126155
Lonicera japonica GWHAAZE00000134 4 CH_lonja_105 8 14 0.000000000000287072
Lonicera japonica GWHAAZE00000001 4 CH_lonja_190 5 5 0.00000000529642
Lonicera japonica GWHAAZE00000002 4 CH_lonja_24 18 49 7.81933e-30
Lonicera japonica GWHAAZE00000002 4 CH_lonja_53 11 20 2.63077e-19
Lonicera japonica GWHAAZE00000003 4 CH_lonja_576 3 3 0.000721145
Lonicera japonica GWHAAZE00000001 4 CH_lonja_96 12 72 0.000000000000068649
Lactuca sativa Lsat_1_v8_lg_9 4 CH_lsa_27 9 12 7.46219e-19
Magnolia biondii Chr17 4 CH_mbi_215 5 11 0.000000184772
Magnolia biondii Chr06 4 CH_mbi_225 5 12 0.000000316346
Magnolia biondii Chr02 4 CH_mbi_246 6 32 0.000000531697
Malus domestica Chr11 4 CH_mdo_193 6 24 0.0000000468552
Malus domestica Chr10 4 CH_mdo_276 4 5 0.000000993166
Malus domestica Chr10 4 CH_mdo_412 4 10 0.0000414849
Manihot esculenta Chromosome08 4 CH_mes_1 30 30 3.94036e-76
Manihot esculenta Chromosome17 4 CH_mes_136 5 5 0.00000000363215
Manihot esculenta Chromosome01 4 CH_mes_394 3 3 0.000572411
Marchantia polymorpha scaffold_180 4 CH_mpo_37 8 30 0.0000000731871
Marchantia polymorpha scaffold_10 4 CH_mpo_5 10 13 1.04288e-16
Marchantia polymorpha scaffold_193 4 CH_mpo_6 11 19 1.36854e-16
Marchantia polymorpha scaffold_85 4 CH_mpo_61 4 4 0.0000171769
Marchantia polymorpha scaffold_31 4 CH_mpo_8 11 23 0.0000000000000024028
Medicago truncatula chr6 4 CH_mtr_122 6 7 0.0000000000059778
Medicago truncatula chr2 4 CH_mtr_295 5 10 0.0000001371
Medicago truncatula chr8 4 CH_mtr_53 9 17 7.22586e-17
Medicago truncatula chr4 4 CH_mtr_599 3 3 0.000216046
Medicago truncatula chr2 4 CH_mtr_600 3 3 0.000216046
Medicago truncatula chr2 4 CH_mtr_601 3 3 0.000216046
Medicago truncatula chr3 4 CH_mtr_761 3 4 0.000863126
Nicotiana tabacum Nitab4.5_0000081 4 CH_nta_107 3 4 0.000211095
Nicotiana tabacum Nitab4.5_0000044 4 CH_nta_7 5 5 0.0000000000878008
Olea europaea chr21 4 CH_oeu_41 5 8 0.00000000466158
Oryza sativa ssp. japonica chr03 4 CH_osa_159 4 4 0.000000359906
Oryza sativa ssp. japonica chr12 4 CH_osa_160 4 4 0.000000359906
Oryza sativa ssp. japonica chr09 4 CH_osa_372 3 3 0.000209676
Oryza sativa ssp. japonica chr08 4 CH_osa_6 11 11 1.0099e-26
Petunia axillaris Peaxi162Scf00409 4 CH_pax_23 7 10 0.000000000000793978
Petunia axillaris Peaxi162Scf00194 4 CH_pax_24 7 10 0.000000000000793978
Petunia axillaris Peaxi162Scf00040 4 CH_pax_279 3 3 0.00032433
Punica granatum NC_045134.1 4 CH_pgr_103 5 5 0.00000000287821
Punica granatum NC_045134.1 4 CH_pgr_140 5 8 0.000000160181
Punica granatum NC_045128.1 4 CH_pgr_15 9 10 9.25434e-19
Punica granatum NC_045128.1 4 CH_pgr_200 4 5 0.00000579943
Punica granatum NC_045131.1 4 CH_pgr_80 6 8 0.000000000195738
Physcomitrium patens Chr23 4 CH_ppa_3 8 10 4.32675e-16
Prunus persica Pp05 4 CH_ppe_267 4 6 0.0000118264
Prunus persica Pp07 4 CH_ppe_407 3 3 0.000347778
Prunus persica Pp04 4 CH_ppe_50 8 10 8.04012e-16
Prunus persica Pp06 4 CH_ppe_96 6 6 0.000000000003898
Pisum sativum chr1LG6 4 CH_psa_246 3 3 0.0000705962
Pisum sativum chr1LG6 4 CH_psa_247 3 3 0.0000705962
Pisum sativum chr7LG7 4 CH_psa_260 4 16 0.000149108
Papaver somniferum NC_039359.1 4 CH_pso_119 6 8 0.0000000000342203
Papaver somniferum NC_039359.1 4 CH_pso_139 7 21 0.000000000211139
Papaver somniferum NW_020619603.1 4 CH_pso_16 11 14 3.2294e-24
Papaver somniferum NC_039359.1 4 CH_pso_168 6 12 0.00000000112338
Papaver somniferum NC_039359.1 4 CH_pso_292 4 4 0.000000525914
Papaver somniferum NW_020625264.1 4 CH_pso_31 9 11 2.26065e-19
Papaver somniferum NC_039362.1 4 CH_pso_451 4 9 0.0000658564
Papaver somniferum NC_039364.1 4 CH_pso_47 8 10 1.24383e-16
Papaver somniferum NC_039359.1 4 CH_pso_596 3 3 0.000340773
Populus trichocarpa Chr13 4 CH_ptr_124 6 8 0.000000000269833
Populus trichocarpa Chr04 4 CH_ptr_35 10 13 9.32948e-20
Populus trichocarpa Chr10 4 CH_ptr_351 5 24 0.000159013
Populus trichocarpa Chr13 4 CH_ptr_45 8 8 5.77335e-17
Populus trichocarpa Chr19 4 CH_ptr_89 7 10 0.00000000000283496
Phaseolus vulgaris Chr10 4 CH_pvu_125 4 4 0.00000019419
Phaseolus vulgaris Chr08 4 CH_pvu_29 8 9 8.54561e-18
Quercus lobata 1 4 CH_qlo_168 7 7 0.0000000000000416024
Quercus lobata 10 4 CH_qlo_257 8 24 0.0000000000768759
Quercus lobata 5 4 CH_qlo_342 6 11 0.0000000072157
Quercus lobata 11 4 CH_qlo_397 5 6 0.0000000355657
Quercus lobata 5 4 CH_qlo_69 10 11 7.85742e-21
Quercus lobata CM012294 4 CH_qlo_760 4 7 0.000076941
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_193 5 6 0.00000000195954
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_59 8 9 7.64741e-18
Rhododendron simsii chr03 4 CH_rsi_229 4 4 0.000000480247
Rhododendron simsii chr11 4 CH_rsi_3 25 36 3.67449e-57
Salvia bowleyana GWHASIU00000002 4 CH_sbo_237 5 16 0.00000180256
Salvia bowleyana GWHASIU00000002 4 CH_sbo_8 18 44 2.33296e-35
Salix brachista GWHAAZH00000010 4 CH_sbr_220 3 3 0.0000389842
Simmondsia chinensis GWHAASQ00000013 4 CH_sci_26 5 5 0.000000000335367
Sechium edule LG08 4 CH_sed_70 5 8 0.0000000185605
Sequoiadendron giganteum chr3 4 CH_sgi_146 14 65 3.77859e-18
Sequoiadendron giganteum chr1 4 CH_sgi_164 8 8 1.8463e-16
Sequoiadendron giganteum chr6 4 CH_sgi_374 9 38 0.0000000000770963
Sequoiadendron giganteum chr3 4 CH_sgi_58 12 12 1.0051e-26
Sequoiadendron giganteum chr1 4 CH_sgi_633 5 7 0.000000175522
Sequoiadendron giganteum chr8 4 CH_sgi_719 5 9 0.00000104813
Sequoiadendron giganteum chr3 4 CH_sgi_774 4 4 0.00000294665
Sequoiadendron giganteum chr7 4 CH_sgi_873 4 5 0.0000146993
Solanum lycopersicum SL4.0ch09 4 CH_sly_112 5 6 0.00000000153101
Solanum lycopersicum SL4.0ch11 4 CH_sly_168 4 4 0.000000177644
Solanum lycopersicum SL4.0ch01 4 CH_sly_215 4 5 0.000000887171
Selaginella moellendorffii scaffold_27 4 CH_smo_49 5 9 0.00000050035
Selaginella moellendorffii scaffold_40 4 CH_smo_84 4 6 0.0000217245
Schrenkiella parvula ch7-1 4 CH_spa_19 7 23 0.000000000121697
Solanum pennellii Spenn-ch11 4 CH_spe_134 4 4 0.0000000714735
Solanum pennellii Spenn-ch01 4 CH_spe_182 6 50 0.0000012183
Solanum pennellii Spenn-ch01 4 CH_spe_34 6 6 0.0000000000000797632
Solanum pennellii Spenn-ch09 4 CH_spe_373 3 4 0.000262119
Solanum tuberosum ST4.03ch01 4 CH_stu_20 11 17 3.04354e-23
Solanum tuberosum ST4.03ch11 4 CH_stu_212 4 4 0.000000225232
Solanum tuberosum ST4.03ch10 4 CH_stu_256 4 5 0.00000112479
Solanum tuberosum ST4.03ch09 4 CH_stu_257 4 5 0.00000112479
Solanum tuberosum ST4.03ch01 4 CH_stu_41 8 10 4.43914e-17
Selenicereus undatus Scaffold_33676 4 CH_sun_6 10 16 4.69184e-21
Trochodendron aralioides group6 4 CH_tar_148 6 21 0.000000375546
Trochodendron aralioides group13 4 CH_tar_175 4 4 0.00000125272
Trochodendron aralioides group3 4 CH_tar_189 5 12 0.00000234957
Trochodendron aralioides group13 4 CH_tar_211 4 5 0.00000625138
Trochodendron aralioides group9 4 CH_tar_424 3 3 0.000515177
Trochodendron aralioides group18 4 CH_tar_45 7 13 0.0000000000283233
Theobroma cacao Chromosome_5 4 CH_tca_3 20 25 5.21286e-47
Tarenaya hassleriana NW_010961290.1 4 CH_tha_96 3 3 0.0000522517
Trifolium pratense Tp57577_TGAC_v2_LG7 4 CH_tpr_237 3 3 0.000106077
Trifolium pratense Tp57577_TGAC_v2_LG5 4 CH_tpr_238 3 3 0.000106077
Trifolium pratense Tp57577_TGAC_v2_LG7 4 CH_tpr_314 3 4 0.000423808
Trifolium pratense Tp57577_TGAC_v2_LG2 4 CH_tpr_47 5 6 0.00000000142083
Tripterygium wilfordii NC_052235.1 4 CH_twi_127 4 4 0.000000668341
Tripterygium wilfordii NC_052235.1 4 CH_twi_5 14 20 1.42631e-29
Tripterygium wilfordii NC_052246.1 4 CH_twi_60 5 5 0.00000000134239
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_38 6 7 0.00000000000571854
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_5 9 9 3.51832e-21
Vanilla planifolia CM028150.1 4 CH_vpl_18 6 6 0.000000000000302196
Vanilla planifolia CM028157.1 4 CH_vpl_228 3 3 0.000101066
Vitis vinifera chr14 4 CH_vvi_13 16 40 2.67352e-29
Vitis vinifera chr14 4 CH_vvi_342 3 3 0.000240573
Zea mays 4 4 CH_zma_1 18 18 2.58423e-44
Zea mays 10 4 CH_zma_108 5 9 0.000000298201

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001