Functional clusters

Information

  • Type Gene Ontology
  • Description membrane coat

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 3 CH_arhy_597 3 3 0.000387182
Camellia sinensis var. sinensis Chr10 3 CH_camsi_438 4 7 0.0000129371
Carica papaya supercontig_180 3 CH_cpa_191 3 3 0.000133943
Fragaria x ananassa Fvb5-1 3 CH_fan_402 4 9 0.000153782
Fragaria vesca Fvb5 3 CH_fve_241 4 11 0.0000501825
Magnolia biondii Chr10 3 CH_mbi_499 3 3 0.000177315
Malus domestica Chr10 3 CH_mdo_22 12 31 1.45729e-20
Sequoiadendron giganteum chr10 3 CH_sgi_1066 3 4 0.000110568
Trochodendron aralioides group3 3 CH_tar_434 3 3 0.000553327
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 4 CH_arhy_597 3 3 0.000387182
Camellia sinensis var. sinensis Chr10 4 CH_camsi_438 4 7 0.0000129371
Carica papaya supercontig_180 4 CH_cpa_191 3 3 0.000133943
Fragaria x ananassa Fvb5-1 4 CH_fan_402 4 9 0.000153782
Fragaria vesca Fvb5 4 CH_fve_241 4 11 0.0000501825
Magnolia biondii Chr10 4 CH_mbi_499 3 3 0.000177315
Malus domestica Chr10 4 CH_mdo_22 12 31 1.45729e-20
Sequoiadendron giganteum chr10 4 CH_sgi_1066 3 4 0.000110568
Trochodendron aralioides group3 4 CH_tar_434 3 3 0.000553327

Available child term results

Ontology identifier Description Number of clusters
GO:0030121 AP-1 adaptor complex 4
GO:0030122 AP-2 adaptor complex 6
GO:0030123 AP-3 adaptor complex 16
GO:0030126 COPI vesicle coat 8
GO:0030127 COPII vesicle coat 16
GO:0030132 clathrin coat of coated pit 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001