Functional clusters
Information
- Type Gene Ontology
- Description membrane coat
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 3 | CH_arhy_597 | 3 | 3 | 0.000387182 |
Camellia sinensis var. sinensis | Chr10 | 3 | CH_camsi_438 | 4 | 7 | 0.0000129371 |
Carica papaya | supercontig_180 | 3 | CH_cpa_191 | 3 | 3 | 0.000133943 |
Fragaria x ananassa | Fvb5-1 | 3 | CH_fan_402 | 4 | 9 | 0.000153782 |
Fragaria vesca | Fvb5 | 3 | CH_fve_241 | 4 | 11 | 0.0000501825 |
Magnolia biondii | Chr10 | 3 | CH_mbi_499 | 3 | 3 | 0.000177315 |
Malus domestica | Chr10 | 3 | CH_mdo_22 | 12 | 31 | 1.45729e-20 |
Sequoiadendron giganteum | chr10 | 3 | CH_sgi_1066 | 3 | 4 | 0.000110568 |
Trochodendron aralioides | group3 | 3 | CH_tar_434 | 3 | 3 | 0.000553327 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 4 | CH_arhy_597 | 3 | 3 | 0.000387182 |
Camellia sinensis var. sinensis | Chr10 | 4 | CH_camsi_438 | 4 | 7 | 0.0000129371 |
Carica papaya | supercontig_180 | 4 | CH_cpa_191 | 3 | 3 | 0.000133943 |
Fragaria x ananassa | Fvb5-1 | 4 | CH_fan_402 | 4 | 9 | 0.000153782 |
Fragaria vesca | Fvb5 | 4 | CH_fve_241 | 4 | 11 | 0.0000501825 |
Magnolia biondii | Chr10 | 4 | CH_mbi_499 | 3 | 3 | 0.000177315 |
Malus domestica | Chr10 | 4 | CH_mdo_22 | 12 | 31 | 1.45729e-20 |
Sequoiadendron giganteum | chr10 | 4 | CH_sgi_1066 | 3 | 4 | 0.000110568 |
Trochodendron aralioides | group3 | 4 | CH_tar_434 | 3 | 3 | 0.000553327 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0030121 | AP-1 adaptor complex | 4 |
GO:0030122 | AP-2 adaptor complex | 6 |
GO:0030123 | AP-3 adaptor complex | 16 |
GO:0030126 | COPI vesicle coat | 8 |
GO:0030127 | COPII vesicle coat | 16 |
GO:0030132 | clathrin coat of coated pit | 8 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |