Functional clusters
Information
- Type Gene Ontology
- Description heme binding
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aquilegia oxysepala | CHR01 | 3 | CH_aox_38 | 15 | 58 | 0.000000000852319 |
Aquilegia oxysepala | CHR01 | 3 | CH_aox_90 | 13 | 59 | 0.000000409547 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 3 | CH_arhy_276 | 11 | 39 | 0.000000152084 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 3 | CH_arhy_314 | 11 | 44 | 0.000000655516 |
Brassica napus | C01 | 3 | CH_bna_189 | 9 | 23 | 0.000000144869 |
Brassica oleracea | C1 | 3 | CH_bol_85 | 9 | 20 | 0.00000000974522 |
Camellia sinensis var. sinensis | Chr11 | 3 | CH_camsi_111 | 8 | 8 | 0.0000000000261226 |
Coffea canephora | chr0 | 3 | CH_ccan_9 | 11 | 63 | 0.0000000000000254539 |
Citrus clementina | scaffold_2 | 3 | CH_ccl_199 | 13 | 60 | 0.000000607904 |
Cardamine hirsuta | Chr8 | 3 | CH_chi_396 | 4 | 4 | 0.000930795 |
Carya illinoinensis | Chr14 | 3 | CH_cil_274 | 12 | 64 | 0.00000649617 |
Cucumis melo | chr04 | 3 | CH_cme_251 | 5 | 8 | 0.000459938 |
Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 3 | CH_cqu_132 | 7 | 7 | 0.0000000261423 |
Chenopodium quinoa | C_Quinoa_Scaffold_1995 | 3 | CH_cqu_165 | 8 | 12 | 0.000000217658 |
Capsella rubella | scaffold_7 | 3 | CH_cru_40 | 12 | 25 | 0.00000000000292983 |
Daucus carota | DCARv2_Chr1 | 3 | CH_dca_75 | 12 | 36 | 0.00000000308501 |
Fragaria x ananassa | Fvb3-4 | 3 | CH_fan_165 | 6 | 6 | 0.000000300249 |
Fragaria vesca | Fvb3 | 3 | CH_fve_154 | 7 | 11 | 0.000000668311 |
Glycine max | Gm15 | 3 | CH_gma_490 | 6 | 14 | 0.000626556 |
Glycine max | Gm09 | 3 | CH_gma_96 | 8 | 10 | 0.00000000161294 |
Helianthus annuus | HanXRQChr08 | 3 | CH_han_606 | 9 | 35 | 0.000283077 |
Helianthus annuus | HanXRQChr11 | 3 | CH_han_612 | 8 | 25 | 0.000295758 |
Helianthus annuus | HanXRQChr16 | 3 | CH_han_67 | 16 | 37 | 0.0000000000000207294 |
Hydrangea macrophylla | Hma1.2p1_0170F.1 | 3 | CH_hma_90 | 6 | 8 | 0.00000162201 |
Lonicera japonica | GWHAAZE00000005 | 3 | CH_lonja_166 | 11 | 20 | 0.00000000080215 |
Lactuca sativa | Lsat_1_v8_lg_6 | 3 | CH_lsa_355 | 6 | 10 | 0.000127249 |
Medicago truncatula | chr6 | 3 | CH_mtr_215 | 13 | 52 | 0.00000000444751 |
Oryza sativa ssp. japonica | chr03 | 3 | CH_osa_107 | 11 | 30 | 0.00000000785294 |
Punica granatum | NC_045129.1 | 3 | CH_pgr_231 | 6 | 9 | 0.0000240698 |
Pisum sativum | chr5LG3 | 3 | CH_psa_159 | 6 | 10 | 0.00000720635 |
Papaver somniferum | NC_039365.1 | 3 | CH_pso_205 | 14 | 79 | 0.0000000138318 |
Papaver somniferum | NC_039360.1 | 3 | CH_pso_209 | 8 | 13 | 0.0000000183534 |
Phaseolus vulgaris | Chr06 | 3 | CH_pvu_138 | 13 | 65 | 0.000000396318 |
Phaseolus vulgaris | Chr10 | 3 | CH_pvu_258 | 10 | 49 | 0.0000746593 |
Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_246 | 7 | 8 | 0.0000000267788 |
Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_417 | 6 | 8 | 0.00000708827 |
Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_453 | 7 | 15 | 0.0000198737 |
Salvia bowleyana | GWHASIU00000008 | 3 | CH_sbo_26 | 24 | 74 | 6.04478e-24 |
Sequoiadendron giganteum | chr9 | 3 | CH_sgi_1039 | 6 | 7 | 0.0000807239 |
Sequoiadendron giganteum | chr2 | 3 | CH_sgi_307 | 10 | 10 | 0.00000000000503838 |
Sequoiadendron giganteum | chr7 | 3 | CH_sgi_710 | 9 | 15 | 0.00000085903 |
Sapria himalayana | scaffold5_19632047 | 3 | CH_shi_175 | 6 | 51 | 0.0000796759 |
Solanum lycopersicum | SL4.0ch04 | 3 | CH_sly_266 | 7 | 12 | 0.00000691263 |
Solanum pennellii | Spenn-ch04 | 3 | CH_spe_62 | 9 | 13 | 0.0000000000893996 |
Solanum tuberosum | ST4.03ch04 | 3 | CH_stu_162 | 10 | 19 | 0.00000000614559 |
Solanum tuberosum | ST4.03ch04 | 3 | CH_stu_348 | 8 | 20 | 0.0000282855 |
Selenicereus undatus | Scaffold_33676 | 3 | CH_sun_60 | 5 | 5 | 0.00000305318 |
Trifolium pratense | Tp57577_TGAC_v2_LG4 | 3 | CH_tpr_143 | 13 | 74 | 0.0000062356 |
Tripterygium wilfordii | NC_052235.1 | 3 | CH_twi_262 | 6 | 12 | 0.000222966 |
Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_119 | 7 | 9 | 0.000000321429 |
Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_355 | 9 | 41 | 0.000564168 |
Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_40 | 13 | 29 | 0.0000000000109428 |
Vanilla planifolia | CM028150.1 | 3 | CH_vpl_276 | 7 | 24 | 0.000233026 |
Zea mays | 1 | 3 | CH_zma_168 | 8 | 21 | 0.0000135906 |
Aquilegia oxysepala | CHR01 | 4 | CH_aox_38 | 15 | 58 | 0.000000000852319 |
Aquilegia oxysepala | CHR01 | 4 | CH_aox_90 | 13 | 59 | 0.000000409547 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 4 | CH_arhy_276 | 11 | 39 | 0.000000152084 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 4 | CH_arhy_314 | 11 | 44 | 0.000000655516 |
Brassica napus | C01 | 4 | CH_bna_189 | 9 | 23 | 0.000000144869 |
Brassica oleracea | C1 | 4 | CH_bol_85 | 9 | 20 | 0.00000000974522 |
Camellia sinensis var. sinensis | Chr11 | 4 | CH_camsi_111 | 8 | 8 | 0.0000000000261226 |
Coffea canephora | chr0 | 4 | CH_ccan_9 | 11 | 63 | 0.0000000000000254539 |
Citrus clementina | scaffold_2 | 4 | CH_ccl_199 | 13 | 60 | 0.000000607904 |
Cardamine hirsuta | Chr8 | 4 | CH_chi_396 | 4 | 4 | 0.000930795 |
Carya illinoinensis | Chr14 | 4 | CH_cil_274 | 12 | 64 | 0.00000649617 |
Cucumis melo | chr04 | 4 | CH_cme_251 | 5 | 8 | 0.000459938 |
Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 4 | CH_cqu_132 | 7 | 7 | 0.0000000261423 |
Chenopodium quinoa | C_Quinoa_Scaffold_1995 | 4 | CH_cqu_165 | 8 | 12 | 0.000000217658 |
Capsella rubella | scaffold_7 | 4 | CH_cru_40 | 12 | 25 | 0.00000000000292983 |
Daucus carota | DCARv2_Chr1 | 4 | CH_dca_75 | 12 | 36 | 0.00000000308501 |
Fragaria x ananassa | Fvb3-4 | 4 | CH_fan_165 | 6 | 6 | 0.000000300249 |
Fragaria vesca | Fvb3 | 4 | CH_fve_154 | 7 | 11 | 0.000000668311 |
Glycine max | Gm15 | 4 | CH_gma_490 | 6 | 14 | 0.000626556 |
Glycine max | Gm09 | 4 | CH_gma_96 | 8 | 10 | 0.00000000161294 |
Helianthus annuus | HanXRQChr08 | 4 | CH_han_606 | 9 | 35 | 0.000283077 |
Helianthus annuus | HanXRQChr11 | 4 | CH_han_612 | 8 | 25 | 0.000295758 |
Helianthus annuus | HanXRQChr16 | 4 | CH_han_67 | 16 | 37 | 0.0000000000000207294 |
Hydrangea macrophylla | Hma1.2p1_0170F.1 | 4 | CH_hma_90 | 6 | 8 | 0.00000162201 |
Lonicera japonica | GWHAAZE00000005 | 4 | CH_lonja_166 | 11 | 20 | 0.00000000080215 |
Lactuca sativa | Lsat_1_v8_lg_6 | 4 | CH_lsa_355 | 6 | 10 | 0.000127249 |
Medicago truncatula | chr6 | 4 | CH_mtr_215 | 13 | 52 | 0.00000000444751 |
Oryza sativa ssp. japonica | chr03 | 4 | CH_osa_107 | 11 | 30 | 0.00000000785294 |
Punica granatum | NC_045129.1 | 4 | CH_pgr_231 | 6 | 9 | 0.0000240698 |
Pisum sativum | chr5LG3 | 4 | CH_psa_159 | 6 | 10 | 0.00000720635 |
Papaver somniferum | NC_039365.1 | 4 | CH_pso_205 | 14 | 79 | 0.0000000138318 |
Papaver somniferum | NC_039360.1 | 4 | CH_pso_209 | 8 | 13 | 0.0000000183534 |
Phaseolus vulgaris | Chr06 | 4 | CH_pvu_138 | 13 | 65 | 0.000000396318 |
Phaseolus vulgaris | Chr10 | 4 | CH_pvu_258 | 10 | 49 | 0.0000746593 |
Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_246 | 7 | 8 | 0.0000000267788 |
Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_417 | 6 | 8 | 0.00000708827 |
Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_453 | 7 | 15 | 0.0000198737 |
Salvia bowleyana | GWHASIU00000008 | 4 | CH_sbo_26 | 24 | 74 | 6.04478e-24 |
Sequoiadendron giganteum | chr9 | 4 | CH_sgi_1039 | 6 | 7 | 0.0000807239 |
Sequoiadendron giganteum | chr2 | 4 | CH_sgi_307 | 10 | 10 | 0.00000000000503838 |
Sequoiadendron giganteum | chr7 | 4 | CH_sgi_710 | 9 | 15 | 0.00000085903 |
Sapria himalayana | scaffold5_19632047 | 4 | CH_shi_175 | 6 | 51 | 0.0000796759 |
Solanum lycopersicum | SL4.0ch04 | 4 | CH_sly_266 | 7 | 12 | 0.00000691263 |
Solanum pennellii | Spenn-ch04 | 4 | CH_spe_62 | 9 | 13 | 0.0000000000893996 |
Solanum tuberosum | ST4.03ch04 | 4 | CH_stu_162 | 10 | 19 | 0.00000000614559 |
Solanum tuberosum | ST4.03ch04 | 4 | CH_stu_348 | 8 | 20 | 0.0000282855 |
Selenicereus undatus | Scaffold_33676 | 4 | CH_sun_60 | 5 | 5 | 0.00000305318 |
Trifolium pratense | Tp57577_TGAC_v2_LG4 | 4 | CH_tpr_143 | 13 | 74 | 0.0000062356 |
Tripterygium wilfordii | NC_052235.1 | 4 | CH_twi_262 | 6 | 12 | 0.000222966 |
Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_119 | 7 | 9 | 0.000000321429 |
Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_355 | 9 | 41 | 0.000564168 |
Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_40 | 13 | 29 | 0.0000000000109428 |
Vanilla planifolia | CM028150.1 | 4 | CH_vpl_276 | 7 | 24 | 0.000233026 |
Zea mays | 1 | 4 | CH_zma_168 | 8 | 21 | 0.0000135906 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |