Functional clusters
Information
- Type Gene Ontology
- Description IgE binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00002 | 3 | CH_atr_319 | 2 | 3 | 0.000714919 |
| Cannabis sativa | NC_044376.1 | 3 | CH_cansat_372 | 2 | 2 | 0.000984963 |
| Capsicum annuum | PGAv.1.6.scaffold1094 | 3 | CH_can_381 | 2 | 2 | 0.000247831 |
| Cardamine hirsuta | Chr3 | 3 | CH_chi_293 | 2 | 2 | 0.000207361 |
| Eutrema salsugineum | scaffold_13 | 3 | CH_esa_201 | 2 | 2 | 0.00022845 |
| Glycine max | Gm20 | 3 | CH_gma_186 | 3 | 3 | 0.000000356564 |
| Gossypium raimondii | Chr06 | 3 | CH_gra_340 | 2 | 2 | 0.000536107 |
| Lupinus albus | Lalb_Chr06 | 3 | CH_lal_29 | 5 | 5 | 0.00000000000000318693 |
| Lotus japonicus | chr5 | 3 | CH_lja_359 | 2 | 2 | 0.000715077 |
| Magnolia biondii | Chr01 | 3 | CH_mbi_345 | 3 | 8 | 0.000011089 |
| Malus domestica | Chr16 | 3 | CH_mdo_712 | 2 | 2 | 0.000796344 |
| Manihot esculenta | Chromosome05 | 3 | CH_mes_95 | 4 | 4 | 0.0000000000102468 |
| Medicago truncatula | chr7 | 3 | CH_mtr_79 | 5 | 6 | 0.0000000000000323154 |
| Oryza sativa ssp. japonica | chr07 | 3 | CH_osa_12 | 8 | 12 | 2.29947e-22 |
| Papaver somniferum | NC_039367.1 | 3 | CH_pso_684 | 2 | 2 | 0.000811057 |
| Populus trichocarpa | Chr05 | 3 | CH_ptr_397 | 2 | 2 | 0.000346801 |
| Phaseolus vulgaris | Chr07 | 3 | CH_pvu_35 | 6 | 7 | 2.8333e-17 |
| Solanum lycopersicum | SL4.0ch09 | 3 | CH_sly_496 | 2 | 2 | 0.000352164 |
| Solanum pennellii | Spenn-ch09 | 3 | CH_spe_383 | 2 | 2 | 0.000266874 |
| Vigna mungo | CM024071.1 | 3 | CH_vmu_92 | 3 | 3 | 0.000000219194 |
| Amborella trichopoda | AmTr_v1.0_scaffold00002 | 4 | CH_atr_319 | 2 | 3 | 0.000714919 |
| Cannabis sativa | NC_044376.1 | 4 | CH_cansat_372 | 2 | 2 | 0.000984963 |
| Capsicum annuum | PGAv.1.6.scaffold1094 | 4 | CH_can_381 | 2 | 2 | 0.000247831 |
| Cardamine hirsuta | Chr3 | 4 | CH_chi_293 | 2 | 2 | 0.000207361 |
| Eutrema salsugineum | scaffold_13 | 4 | CH_esa_201 | 2 | 2 | 0.00022845 |
| Glycine max | Gm20 | 4 | CH_gma_186 | 3 | 3 | 0.000000356564 |
| Gossypium raimondii | Chr06 | 4 | CH_gra_340 | 2 | 2 | 0.000536107 |
| Lupinus albus | Lalb_Chr06 | 4 | CH_lal_29 | 5 | 5 | 0.00000000000000318693 |
| Lotus japonicus | chr5 | 4 | CH_lja_359 | 2 | 2 | 0.000715077 |
| Magnolia biondii | Chr01 | 4 | CH_mbi_345 | 3 | 8 | 0.000011089 |
| Malus domestica | Chr16 | 4 | CH_mdo_712 | 2 | 2 | 0.000796344 |
| Manihot esculenta | Chromosome05 | 4 | CH_mes_95 | 4 | 4 | 0.0000000000102468 |
| Medicago truncatula | chr7 | 4 | CH_mtr_79 | 5 | 6 | 0.0000000000000323154 |
| Oryza sativa ssp. japonica | chr07 | 4 | CH_osa_12 | 8 | 12 | 2.29947e-22 |
| Papaver somniferum | NC_039367.1 | 4 | CH_pso_684 | 2 | 2 | 0.000811057 |
| Populus trichocarpa | Chr05 | 4 | CH_ptr_397 | 2 | 2 | 0.000346801 |
| Phaseolus vulgaris | Chr07 | 4 | CH_pvu_35 | 6 | 7 | 2.8333e-17 |
| Solanum lycopersicum | SL4.0ch09 | 4 | CH_sly_496 | 2 | 2 | 0.000352164 |
| Solanum pennellii | Spenn-ch09 | 4 | CH_spe_383 | 2 | 2 | 0.000266874 |
| Vigna mungo | CM024071.1 | 4 | CH_vmu_92 | 3 | 3 | 0.000000219194 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |