Functional clusters
Information
- Type Gene Ontology
- Description nucleobase-containing compound kinase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Malus domestica | Chr09 | 3 | CH_mdo_301 | 5 | 31 | 0.00000249636 |
Quercus lobata | 10 | 3 | CH_qlo_845 | 4 | 24 | 0.000177301 |
Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_266 | 3 | 4 | 0.000169579 |
Vitis vinifera | chr17 | 3 | CH_vvi_209 | 4 | 13 | 0.00000686943 |
Malus domestica | Chr09 | 4 | CH_mdo_301 | 5 | 31 | 0.00000249636 |
Quercus lobata | 10 | 4 | CH_qlo_845 | 4 | 24 | 0.000177301 |
Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_266 | 3 | 4 | 0.000169579 |
Vitis vinifera | chr17 | 4 | CH_vvi_209 | 4 | 13 | 0.00000686943 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0004017 | adenylate kinase activity | 6 |
GO:0004127 | cytidylate kinase activity | 10 |
GO:0004385 | guanylate kinase activity | 6 |
GO:0004797 | thymidine kinase activity | 16 |
GO:0004849 | uridine kinase activity | 4 |
GO:0009041 | uridylate kinase activity | 4 |
GO:0019136 | deoxynucleoside kinase activity | 2 |
GO:0033862 | UMP kinase activity | 2 |
GO:0051731 | polynucleotide 5'-hydroxyl-kinase activity | 18 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |