Functional clusters

Information

  • Type Gene Ontology
  • Description acetoacetyl-CoA reductase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_3895_HRSCAF_3912 3 CH_ama_121 2 2 0.000862218
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 3 CH_amhyb_148 2 2 0.000252525
Aquilegia oxysepala CHR05 3 CH_aox_182 2 2 0.0000801989
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 3 CH_arhy_571 2 2 0.000299383
Amborella trichopoda AmTr_v1.0_scaffold00049 3 CH_atr_206 2 2 0.0000794407
Beta vulgaris Scaffold_0002 3 CH_bvu_258 2 5 0.000827815
Cannabis sativa NC_044373.1 3 CH_cansat_365 2 6 0.000984834
Corylus avellana 9 3 CH_cav_374 2 2 0.000460017
Citrus clementina scaffold_4 3 CH_ccl_131 3 3 0.0000000100941
Carpinus fangiana Cfa03 3 CH_cfa_23 5 5 2.46796e-16
Durio zibethinus NW_019167971.1 3 CH_dzi_301 2 2 0.000463489
Fragaria x ananassa Fvb4-3 3 CH_fan_12 6 8 1.09423e-17
Fragaria x ananassa Fvb4-1 3 CH_fan_46 5 16 0.0000000000167582
Glycine max Gm11 3 CH_gma_376 2 2 0.000227734
Glycine max Gm18 3 CH_gma_377 2 2 0.000227734
Lactuca sativa Lsat_1_v8_lg_4 3 CH_lsa_486 2 2 0.00077101
Manihot esculenta Chromosome12 3 CH_mes_318 2 2 0.000183189
Oryza sativa ssp. japonica chr06 3 CH_osa_20 6 9 6.52238e-17
Prunus persica Pp01 3 CH_ppe_416 2 4 0.000447544
Populus trichocarpa Chr08 3 CH_ptr_389 2 2 0.000346801
Quercus lobata 3 3 CH_qlo_708 2 2 0.0000516289
Rhododendron simsii chr12 3 CH_rsi_452 2 2 0.000387184
Salix brachista GWHAAZH00000010 3 CH_sbr_237 2 2 0.000063014
Selenicereus undatus Scaffold_19641 3 CH_sun_151 2 2 0.000217992
Trochodendron aralioides group8 3 CH_tar_122 3 4 0.0000000865036
Theobroma cacao Chromosome_2 3 CH_tca_314 2 3 0.000219708
Avicennia marina ScioBoG_3895_HRSCAF_3912 4 CH_ama_121 2 2 0.000862218
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 4 CH_amhyb_148 2 2 0.000252525
Aquilegia oxysepala CHR05 4 CH_aox_182 2 2 0.0000801989
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 4 CH_arhy_571 2 2 0.000299383
Amborella trichopoda AmTr_v1.0_scaffold00049 4 CH_atr_206 2 2 0.0000794407
Beta vulgaris Scaffold_0002 4 CH_bvu_258 2 5 0.000827815
Cannabis sativa NC_044373.1 4 CH_cansat_365 2 6 0.000984834
Corylus avellana 9 4 CH_cav_374 2 2 0.000460017
Citrus clementina scaffold_4 4 CH_ccl_131 3 3 0.0000000100941
Carpinus fangiana Cfa03 4 CH_cfa_23 5 5 2.46796e-16
Durio zibethinus NW_019167971.1 4 CH_dzi_301 2 2 0.000463489
Fragaria x ananassa Fvb4-3 4 CH_fan_12 6 8 1.09423e-17
Fragaria x ananassa Fvb4-1 4 CH_fan_46 5 16 0.0000000000167582
Glycine max Gm11 4 CH_gma_376 2 2 0.000227734
Glycine max Gm18 4 CH_gma_377 2 2 0.000227734
Lactuca sativa Lsat_1_v8_lg_4 4 CH_lsa_486 2 2 0.00077101
Manihot esculenta Chromosome12 4 CH_mes_318 2 2 0.000183189
Oryza sativa ssp. japonica chr06 4 CH_osa_20 6 9 6.52238e-17
Prunus persica Pp01 4 CH_ppe_416 2 4 0.000447544
Populus trichocarpa Chr08 4 CH_ptr_389 2 2 0.000346801
Quercus lobata 3 4 CH_qlo_708 2 2 0.0000516289
Rhododendron simsii chr12 4 CH_rsi_452 2 2 0.000387184
Salix brachista GWHAAZH00000010 4 CH_sbr_237 2 2 0.000063014
Selenicereus undatus Scaffold_19641 4 CH_sun_151 2 2 0.000217992
Trochodendron aralioides group8 4 CH_tar_122 3 4 0.0000000865036
Theobroma cacao Chromosome_2 4 CH_tca_314 2 3 0.000219708

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001