Functional clusters

Information

  • Type Gene Ontology
  • Description peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group21 3 CH_ach_162 2 2 0.000162964
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 3 CH_amhyb_139 2 2 0.000252525
Beta vulgaris Chr4_EL10_PGA_scaffold1 3 CH_bvu_251 2 3 0.000745074
Chara braunii BFEA01000105 3 CH_cbr_168 2 3 0.000647303
Citrus clementina scaffold_9 3 CH_ccl_292 2 2 0.0000820311
Glycine max Gm09 3 CH_gma_140 3 4 0.0000000345748
Lupinus albus Lalb_Chr19 3 CH_lal_282 2 2 0.000157447
Nicotiana tabacum Nitab4.5_0000084 3 CH_nta_108 2 3 0.000329164
Petunia axillaris Peaxi162Scf00444 3 CH_pax_187 2 2 0.0000703556
Solanum lycopersicum SL4.0ch03 3 CH_sly_402 2 3 0.000176077
Solanum pennellii Spenn-ch03 3 CH_spe_330 2 3 0.000133434
Selenicereus undatus Scaffold_19641 3 CH_sun_139 2 2 0.000217992
Actinidia chinensis Lachesis_group21 4 CH_ach_162 2 2 0.000162964
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 4 CH_amhyb_139 2 2 0.000252525
Beta vulgaris Chr4_EL10_PGA_scaffold1 4 CH_bvu_251 2 3 0.000745074
Chara braunii BFEA01000105 4 CH_cbr_168 2 3 0.000647303
Citrus clementina scaffold_9 4 CH_ccl_292 2 2 0.0000820311
Glycine max Gm09 4 CH_gma_140 3 4 0.0000000345748
Lupinus albus Lalb_Chr19 4 CH_lal_282 2 2 0.000157447
Nicotiana tabacum Nitab4.5_0000084 4 CH_nta_108 2 3 0.000329164
Petunia axillaris Peaxi162Scf00444 4 CH_pax_187 2 2 0.0000703556
Solanum lycopersicum SL4.0ch03 4 CH_sly_402 2 3 0.000176077
Solanum pennellii Spenn-ch03 4 CH_spe_330 2 3 0.000133434
Selenicereus undatus Scaffold_19641 4 CH_sun_139 2 2 0.000217992

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001