Functional clusters
Information
- Type Gene Ontology
- Description 6-phosphogluconolactonase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-11 | 3 | CH_aar_241 | 2 | 2 | 0.000547395 |
| Acer truncatum | chr12 | 3 | CH_acertr_380 | 2 | 2 | 0.000211491 |
| Arabidopsis lyrata | scaffold_6 | 3 | CH_aly_89 | 3 | 3 | 0.0000000653509 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 3 | CH_amhyb_151 | 2 | 2 | 0.000252525 |
| Arabidopsis thaliana | Chr5 | 3 | CH_ath_146 | 3 | 4 | 0.0000000492455 |
| Brassica carinata | Contig686 | 3 | CH_bca_19 | 6 | 10 | 1.68838e-16 |
| Brassica carinata | Contig469 | 3 | CH_bca_88 | 4 | 4 | 0.000000000053335 |
| Brassica napus | C07 | 3 | CH_bna_53 | 5 | 9 | 0.000000000000224517 |
| Brassica napus | A06 | 3 | CH_bna_89 | 4 | 5 | 0.0000000000960177 |
| Brassica oleracea | C7 | 3 | CH_bol_12 | 7 | 12 | 9.12677e-21 |
| Brassica rapa | A06 | 3 | CH_bra_23 | 5 | 8 | 0.000000000000179743 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 3 | CH_bvu_211 | 2 | 2 | 0.000248375 |
| Coffea canephora | chr2 | 3 | CH_ccan_263 | 2 | 4 | 0.000127766 |
| Carpinus fangiana | Cfa06 | 3 | CH_cfa_96 | 3 | 3 | 0.0000000344157 |
| Cardamine hirsuta | Chr6 | 3 | CH_chi_115 | 3 | 3 | 0.000000071667 |
| Cucumis melo | chr09 | 3 | CH_cme_260 | 2 | 3 | 0.000600367 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1001 | 3 | CH_cqu_563 | 2 | 2 | 0.000995025 |
| Capsella rubella | scaffold_6 | 3 | CH_cru_100 | 3 | 3 | 0.0000000320764 |
| Cucumis sativus L. | chr5 | 3 | CH_csa_227 | 2 | 2 | 0.000250428 |
| Davidia involucrata | GWHABJS00000004 | 3 | CH_din_403 | 2 | 2 | 0.000750188 |
| Davidia involucrata | GWHABJS00000009 | 3 | CH_din_404 | 2 | 2 | 0.000750188 |
| Eutrema salsugineum | scaffold_6 | 3 | CH_esa_268 | 2 | 2 | 0.000761499 |
| Helianthus annuus | HanXRQChr03 | 3 | CH_han_240 | 4 | 20 | 0.0000000586384 |
| Lupinus albus | Lalb_Chr17 | 3 | CH_lal_404 | 2 | 2 | 0.000787236 |
| Lotus japonicus | chr1 | 3 | CH_lja_122 | 3 | 4 | 0.000000613553 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 3 | CH_lsa_425 | 2 | 2 | 0.000308404 |
| Phaseolus vulgaris | Chr09 | 3 | CH_pvu_104 | 3 | 3 | 0.0000000323906 |
| Sequoiadendron giganteum | HRSCAF_1 | 3 | CH_sgi_1090 | 2 | 3 | 0.000146142 |
| Solanum lycopersicum | SL4.0ch03 | 3 | CH_sly_578 | 2 | 2 | 0.000880411 |
| Schrenkiella parvula | ch2-4 | 3 | CH_spa_45 | 3 | 3 | 0.0000000929892 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 3 | CH_tpr_349 | 2 | 3 | 0.000681233 |
| Vigna mungo | CM024072.1 | 3 | CH_vmu_238 | 2 | 2 | 0.000193842 |
| Aethionema arabicum | LG-11 | 4 | CH_aar_241 | 2 | 2 | 0.000547395 |
| Acer truncatum | chr12 | 4 | CH_acertr_380 | 2 | 2 | 0.000211491 |
| Arabidopsis lyrata | scaffold_6 | 4 | CH_aly_89 | 3 | 3 | 0.0000000653509 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 4 | CH_amhyb_151 | 2 | 2 | 0.000252525 |
| Arabidopsis thaliana | Chr5 | 4 | CH_ath_146 | 3 | 4 | 0.0000000492455 |
| Brassica carinata | Contig686 | 4 | CH_bca_19 | 6 | 10 | 1.68838e-16 |
| Brassica carinata | Contig469 | 4 | CH_bca_88 | 4 | 4 | 0.000000000053335 |
| Brassica napus | C07 | 4 | CH_bna_53 | 5 | 9 | 0.000000000000224517 |
| Brassica napus | A06 | 4 | CH_bna_89 | 4 | 5 | 0.0000000000960177 |
| Brassica oleracea | C7 | 4 | CH_bol_12 | 7 | 12 | 9.12677e-21 |
| Brassica rapa | A06 | 4 | CH_bra_23 | 5 | 8 | 0.000000000000179743 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 4 | CH_bvu_211 | 2 | 2 | 0.000248375 |
| Coffea canephora | chr2 | 4 | CH_ccan_263 | 2 | 4 | 0.000127766 |
| Carpinus fangiana | Cfa06 | 4 | CH_cfa_96 | 3 | 3 | 0.0000000344157 |
| Cardamine hirsuta | Chr6 | 4 | CH_chi_115 | 3 | 3 | 0.000000071667 |
| Cucumis melo | chr09 | 4 | CH_cme_260 | 2 | 3 | 0.000600367 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1001 | 4 | CH_cqu_563 | 2 | 2 | 0.000995025 |
| Capsella rubella | scaffold_6 | 4 | CH_cru_100 | 3 | 3 | 0.0000000320764 |
| Cucumis sativus L. | chr5 | 4 | CH_csa_227 | 2 | 2 | 0.000250428 |
| Davidia involucrata | GWHABJS00000004 | 4 | CH_din_403 | 2 | 2 | 0.000750188 |
| Davidia involucrata | GWHABJS00000009 | 4 | CH_din_404 | 2 | 2 | 0.000750188 |
| Eutrema salsugineum | scaffold_6 | 4 | CH_esa_268 | 2 | 2 | 0.000761499 |
| Helianthus annuus | HanXRQChr03 | 4 | CH_han_240 | 4 | 20 | 0.0000000586384 |
| Lupinus albus | Lalb_Chr17 | 4 | CH_lal_404 | 2 | 2 | 0.000787236 |
| Lotus japonicus | chr1 | 4 | CH_lja_122 | 3 | 4 | 0.000000613553 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 4 | CH_lsa_425 | 2 | 2 | 0.000308404 |
| Phaseolus vulgaris | Chr09 | 4 | CH_pvu_104 | 3 | 3 | 0.0000000323906 |
| Sequoiadendron giganteum | HRSCAF_1 | 4 | CH_sgi_1090 | 2 | 3 | 0.000146142 |
| Solanum lycopersicum | SL4.0ch03 | 4 | CH_sly_578 | 2 | 2 | 0.000880411 |
| Schrenkiella parvula | ch2-4 | 4 | CH_spa_45 | 3 | 3 | 0.0000000929892 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 4 | CH_tpr_349 | 2 | 3 | 0.000681233 |
| Vigna mungo | CM024072.1 | 4 | CH_vmu_238 | 2 | 2 | 0.000193842 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |