Functional clusters

Information

  • Type Gene Ontology
  • Description TBP-class protein binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR02 3 CH_aox_157 4 38 0.0000373617
Brassica napus C04 3 CH_bna_240 3 3 0.000000915266
Cannabis sativa NC_044372.1 3 CH_cansat_169 4 69 0.0000109545
Capsicum annuum PGAv.1.6.scaffold195 3 CH_can_171 3 3 0.000000204743
Carica papaya supercontig_73 3 CH_cpa_269 2 2 0.000570396
Cucumis sativus L. chr3 3 CH_csa_114 3 3 0.000000585356
Petunia axillaris Peaxi162Scf00213 3 CH_pax_110 3 3 0.000000891016
Solanum lycopersicum SL4.0ch08 3 CH_sly_251 3 3 0.00000421679
Zea mays 6 3 CH_zma_203 4 21 0.0000564931
Aquilegia oxysepala CHR02 4 CH_aox_157 4 38 0.0000373617
Brassica napus C04 4 CH_bna_240 3 3 0.000000915266
Cannabis sativa NC_044372.1 4 CH_cansat_169 4 69 0.0000109545
Capsicum annuum PGAv.1.6.scaffold195 4 CH_can_171 3 3 0.000000204743
Carica papaya supercontig_73 4 CH_cpa_269 2 2 0.000570396
Cucumis sativus L. chr3 4 CH_csa_114 3 3 0.000000585356
Petunia axillaris Peaxi162Scf00213 4 CH_pax_110 3 3 0.000000891016
Solanum lycopersicum SL4.0ch08 4 CH_sly_251 3 3 0.00000421679
Zea mays 6 4 CH_zma_203 4 21 0.0000564931

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001