Functional clusters
Information
- Type Gene Ontology
- Description carbon-sulfur lyase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group7 | 3 | CH_ach_24 | 5 | 9 | 0.0000000047232 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 3 | CH_bvu_156 | 3 | 3 | 0.0000417455 |
| Camellia sinensis var. sinensis | Chr4 | 3 | CH_camsi_735 | 3 | 5 | 0.000417115 |
| Cannabis sativa | NC_044370.1 | 3 | CH_cansat_257 | 3 | 5 | 0.00018895 |
| Corylus avellana | 3 | 3 | CH_cav_382 | 3 | 6 | 0.000514706 |
| Coffea canephora | chr10 | 3 | CH_ccan_12 | 6 | 46 | 0.0000000000000763647 |
| Carpinus fangiana | Cfa03 | 3 | CH_cfa_200 | 3 | 3 | 0.0000314387 |
| Cardamine hirsuta | Chr1 | 3 | CH_chi_51 | 6 | 10 | 0.0000000000120613 |
| Corchorus olitorius | AWUE01015287.1 | 3 | CH_col_59 | 4 | 16 | 0.0000665176 |
| Davidia involucrata | GWHABJS00000011 | 3 | CH_din_261 | 3 | 4 | 0.0000981652 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_730 | 3 | 4 | 0.000112062 |
| Glycine max | Gm16 | 3 | CH_gma_305 | 3 | 3 | 0.0000566937 |
| Gossypium raimondii | Chr04 | 3 | CH_gra_200 | 3 | 3 | 0.0000394007 |
| Helianthus annuus | HanXRQChr11 | 3 | CH_han_16 | 11 | 17 | 8.12146e-25 |
| Helianthus annuus | HanXRQChr13 | 3 | CH_han_349 | 4 | 7 | 0.0000025642 |
| Magnolia biondii | Chr16 | 3 | CH_mbi_115 | 5 | 8 | 0.000000000553654 |
| Malus domestica | Chr10 | 3 | CH_mdo_313 | 4 | 8 | 0.00000361052 |
| Manihot esculenta | Chromosome18 | 3 | CH_mes_384 | 3 | 5 | 0.000510291 |
| Prunus persica | Pp08 | 3 | CH_ppe_69 | 6 | 6 | 0.00000000000008439 |
| Pisum sativum | chr5LG3 | 3 | CH_psa_165 | 3 | 3 | 0.00000938779 |
| Papaver somniferum | NW_020624376.1 | 3 | CH_pso_619 | 3 | 6 | 0.000444928 |
| Populus trichocarpa | Chr17 | 3 | CH_ptr_407 | 3 | 5 | 0.000388792 |
| Solanum tuberosum | ST4.03ch10 | 3 | CH_stu_419 | 4 | 16 | 0.0000987465 |
| Theobroma cacao | Chromosome_8 | 3 | CH_tca_234 | 3 | 3 | 0.0000235349 |
| Vitis vinifera | chr18 | 3 | CH_vvi_49 | 7 | 10 | 0.00000000000000285139 |
| Zea mays | 2 | 3 | CH_zma_100 | 4 | 5 | 0.000000132349 |
| Actinidia chinensis | Lachesis_group7 | 4 | CH_ach_24 | 5 | 9 | 0.0000000047232 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 4 | CH_bvu_156 | 3 | 3 | 0.0000417455 |
| Camellia sinensis var. sinensis | Chr4 | 4 | CH_camsi_735 | 3 | 5 | 0.000417115 |
| Cannabis sativa | NC_044370.1 | 4 | CH_cansat_257 | 3 | 5 | 0.00018895 |
| Corylus avellana | 3 | 4 | CH_cav_382 | 3 | 6 | 0.000514706 |
| Coffea canephora | chr10 | 4 | CH_ccan_12 | 6 | 46 | 0.0000000000000763647 |
| Carpinus fangiana | Cfa03 | 4 | CH_cfa_200 | 3 | 3 | 0.0000314387 |
| Cardamine hirsuta | Chr1 | 4 | CH_chi_51 | 6 | 10 | 0.0000000000120613 |
| Corchorus olitorius | AWUE01015287.1 | 4 | CH_col_59 | 4 | 16 | 0.0000665176 |
| Davidia involucrata | GWHABJS00000011 | 4 | CH_din_261 | 3 | 4 | 0.0000981652 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_730 | 3 | 4 | 0.000112062 |
| Glycine max | Gm16 | 4 | CH_gma_305 | 3 | 3 | 0.0000566937 |
| Gossypium raimondii | Chr04 | 4 | CH_gra_200 | 3 | 3 | 0.0000394007 |
| Helianthus annuus | HanXRQChr11 | 4 | CH_han_16 | 11 | 17 | 8.12146e-25 |
| Helianthus annuus | HanXRQChr13 | 4 | CH_han_349 | 4 | 7 | 0.0000025642 |
| Magnolia biondii | Chr16 | 4 | CH_mbi_115 | 5 | 8 | 0.000000000553654 |
| Malus domestica | Chr10 | 4 | CH_mdo_313 | 4 | 8 | 0.00000361052 |
| Manihot esculenta | Chromosome18 | 4 | CH_mes_384 | 3 | 5 | 0.000510291 |
| Prunus persica | Pp08 | 4 | CH_ppe_69 | 6 | 6 | 0.00000000000008439 |
| Pisum sativum | chr5LG3 | 4 | CH_psa_165 | 3 | 3 | 0.00000938779 |
| Papaver somniferum | NW_020624376.1 | 4 | CH_pso_619 | 3 | 6 | 0.000444928 |
| Populus trichocarpa | Chr17 | 4 | CH_ptr_407 | 3 | 5 | 0.000388792 |
| Solanum tuberosum | ST4.03ch10 | 4 | CH_stu_419 | 4 | 16 | 0.0000987465 |
| Theobroma cacao | Chromosome_8 | 4 | CH_tca_234 | 3 | 3 | 0.0000235349 |
| Vitis vinifera | chr18 | 4 | CH_vvi_49 | 7 | 10 | 0.00000000000000285139 |
| Zea mays | 2 | 4 | CH_zma_100 | 4 | 5 | 0.000000132349 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0004121 | cystathionine beta-lyase activity | 6 |
| GO:0004408 | holocytochrome-c synthase activity | 2 |
| GO:0004462 | lactoylglutathione lyase activity | 20 |
| GO:0016847 | 1-aminocyclopropane-1-carboxylate synthase activity | 4 |
| GO:0019148 | D-cysteine desulfhydrase activity | 4 |
| GO:0050017 | L-3-cyanoalanine synthase activity | 10 |
| GO:0080108 | S-alkylthiohydroximate lyase activity | 28 |
| GO:0080146 | L-cysteine desulfhydrase activity | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |