Functional clusters
Information
- Type Gene Ontology
- Description strictosidine synthase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-10 | 3 | CH_aar_26 | 5 | 5 | 0.000000000000240116 |
| Arabidopsis lyrata | scaffold_5 | 3 | CH_aly_135 | 3 | 3 | 0.00000297347 |
| Arabidopsis lyrata | scaffold_2 | 3 | CH_aly_136 | 3 | 3 | 0.00000297347 |
| Arabidopsis lyrata | scaffold_4 | 3 | CH_aly_161 | 3 | 4 | 0.0000118899 |
| Arabidopsis lyrata | scaffold_5 | 3 | CH_aly_180 | 3 | 5 | 0.000029715 |
| Arabidopsis thaliana | Chr3 | 3 | CH_ath_102 | 4 | 7 | 0.00000000336895 |
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_228 | 3 | 4 | 0.00000224043 |
| Arabidopsis thaliana | Chr3 | 3 | CH_ath_265 | 3 | 5 | 0.00000560027 |
| Brassica carinata | ChrC03 | 3 | CH_bca_141 | 4 | 4 | 0.00000000361652 |
| Brassica carinata | ChrC02 | 3 | CH_bca_47 | 6 | 11 | 0.0000000000002824 |
| Brassica carinata | ChrC08 | 3 | CH_bca_86 | 5 | 7 | 0.0000000000316367 |
| Brassica napus | A02 | 3 | CH_bna_185 | 4 | 6 | 0.000000113588 |
| Brassica napus | A04 | 3 | CH_bna_220 | 4 | 8 | 0.000000529651 |
| Brassica napus | C06 | 3 | CH_bna_351 | 4 | 16 | 0.0000137266 |
| Brassica napus | A07 | 3 | CH_bna_354 | 3 | 3 | 0.0000151218 |
| Brassica napus | C02 | 3 | CH_bna_355 | 3 | 3 | 0.0000151218 |
| Brassica napus | C06 | 3 | CH_bna_356 | 3 | 3 | 0.0000151218 |
| Brassica napus | C04 | 3 | CH_bna_62 | 6 | 13 | 0.00000000000307842 |
| Brassica oleracea | C4 | 3 | CH_bol_179 | 4 | 14 | 0.00000214022 |
| Brassica oleracea | C6 | 3 | CH_bol_196 | 3 | 3 | 0.00000525013 |
| Brassica rapa | A07 | 3 | CH_bra_125 | 3 | 3 | 0.00000425765 |
| Brassica rapa | A04 | 3 | CH_bra_151 | 3 | 4 | 0.000017025 |
| Camellia sinensis var. sinensis | Chr15 | 3 | CH_camsi_215 | 4 | 8 | 0.0000000276149 |
| Camellia sinensis var. sinensis | Chr13 | 3 | CH_camsi_260 | 5 | 46 | 0.000000135319 |
| Capsicum annuum | PGAv.1.6.scaffold803 | 3 | CH_can_124 | 4 | 6 | 0.00000000836853 |
| Corylus avellana | 1 | 3 | CH_cav_213 | 3 | 6 | 0.0000290748 |
| Coffea canephora | chr2 | 3 | CH_ccan_150 | 4 | 89 | 0.00000706235 |
| Coffea canephora | chr6 | 3 | CH_ccan_383 | 3 | 39 | 0.000666319 |
| Coffea canephora | chr4 | 3 | CH_ccan_64 | 4 | 17 | 0.0000000173441 |
| Citrus clementina | scaffold_2 | 3 | CH_ccl_118 | 6 | 25 | 0.00000000336115 |
| Citrus clementina | scaffold_1 | 3 | CH_ccl_141 | 4 | 4 | 0.00000002476 |
| Citrus clementina | scaffold_4 | 3 | CH_ccl_47 | 7 | 11 | 0.00000000000000519685 |
| Carpinus fangiana | Cfa02 | 3 | CH_cfa_147 | 3 | 3 | 0.00000189286 |
| Cardamine hirsuta | Chr5 | 3 | CH_chi_27 | 6 | 7 | 0.00000000000000461281 |
| Cardamine hirsuta | Chr2 | 3 | CH_chi_80 | 4 | 4 | 0.00000000303185 |
| Capsella rubella | scaffold_5 | 3 | CH_cru_14 | 7 | 8 | 3.06351e-18 |
| Capsella rubella | scaffold_5 | 3 | CH_cru_192 | 3 | 4 | 0.0000261626 |
| Capsella rubella | scaffold_2 | 3 | CH_cru_78 | 4 | 4 | 0.00000000358854 |
| Daucus carota | DCARv2_Chr6 | 3 | CH_dca_161 | 3 | 3 | 0.00000222097 |
| Daucus carota | DCARv2_Chr2 | 3 | CH_dca_162 | 3 | 3 | 0.00000222097 |
| Davidia involucrata | GWHABJS00000006 | 3 | CH_din_26 | 6 | 7 | 6.09887e-16 |
| Durio zibethinus | NW_019167960.1 | 3 | CH_dzi_178 | 3 | 5 | 0.0000117245 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 3 | CH_eca_190 | 3 | 4 | 0.00000439671 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 3 | CH_eca_45 | 5 | 12 | 0.0000000000481548 |
| Eucalyptus grandis | Chr10 | 3 | CH_egr_227 | 5 | 5 | 0.00000000000102348 |
| Eucalyptus grandis | Chr01 | 3 | CH_egr_575 | 3 | 3 | 0.00000497906 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_722 | 3 | 6 | 0.0000994675 |
| Eutrema salsugineum | scaffold_19 | 3 | CH_esa_42 | 4 | 4 | 0.00000000132621 |
| Eutrema salsugineum | scaffold_9 | 3 | CH_esa_43 | 4 | 4 | 0.00000000132621 |
| Fragaria vesca | Fvb1 | 3 | CH_fve_182 | 3 | 3 | 0.00000291523 |
| Gossypium hirsutum | A11 | 3 | CH_ghi_349 | 3 | 3 | 0.00000830981 |
| Lupinus albus | Lalb_Chr25 | 3 | CH_lal_132 | 3 | 3 | 0.000000495806 |
| Lonicera japonica | GWHAAZE00000005 | 3 | CH_lonja_33 | 10 | 11 | 1.01338e-25 |
| Lonicera japonica | GWHAAZE00000004 | 3 | CH_lonja_424 | 3 | 4 | 0.00012868 |
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_531 | 4 | 27 | 0.000515533 |
| Lonicera japonica | GWHAAZE00000009 | 3 | CH_lonja_62 | 7 | 7 | 1.95529e-17 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 3 | CH_lsa_289 | 3 | 5 | 0.000014419 |
| Magnolia biondii | Chr15 | 3 | CH_mbi_291 | 5 | 80 | 0.00000197755 |
| Medicago truncatula | chr7 | 3 | CH_mtr_124 | 5 | 6 | 0.00000000000681141 |
| Medicago truncatula | chr4 | 3 | CH_mtr_226 | 5 | 17 | 0.00000000699684 |
| Medicago truncatula | chr8 | 3 | CH_mtr_284 | 4 | 7 | 0.0000000920284 |
| Medicago truncatula | chr2 | 3 | CH_mtr_511 | 3 | 5 | 0.0000581983 |
| Punica granatum | NC_045132.1 | 3 | CH_pgr_243 | 3 | 7 | 0.0000649573 |
| Quercus lobata | 6 | 3 | CH_qlo_139 | 6 | 7 | 0.00000000000000107251 |
| Quercus lobata | 6 | 3 | CH_qlo_151 | 6 | 8 | 0.00000000000000428879 |
| Rhododendron simsii | chr08 | 3 | CH_rsi_250 | 3 | 3 | 0.00000137423 |
| Salvia bowleyana | GWHASIU00000002 | 3 | CH_sbo_245 | 3 | 6 | 0.00000347666 |
| Salix brachista | GWHAAZH00000015 | 3 | CH_sbr_6 | 12 | 38 | 2.03015e-25 |
| Sequoiadendron giganteum | chr4 | 3 | CH_sgi_702 | 3 | 3 | 0.000000783163 |
| Solanum lycopersicum | SL4.0ch03 | 3 | CH_sly_105 | 4 | 4 | 0.000000000607262 |
| Schrenkiella parvula | ch5-7 | 3 | CH_spa_24 | 4 | 4 | 0.00000000146586 |
| Schrenkiella parvula | ch5-1 | 3 | CH_spa_72 | 3 | 3 | 0.00000338481 |
| Solanum pennellii | Spenn-ch03 | 3 | CH_spe_178 | 3 | 3 | 0.00000108022 |
| Solanum tuberosum | ST4.03ch03 | 3 | CH_stu_301 | 3 | 4 | 0.00000716754 |
| Trochodendron aralioides | group4 | 3 | CH_tar_178 | 3 | 3 | 0.00000154633 |
| Theobroma cacao | Chromosome_2 | 3 | CH_tca_219 | 3 | 4 | 0.00000920191 |
| Theobroma cacao | Chromosome_5 | 3 | CH_tca_233 | 3 | 5 | 0.0000229976 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 3 | CH_tpr_232 | 3 | 9 | 0.0000865193 |
| Tripterygium wilfordii | NC_052251.1 | 3 | CH_twi_11 | 8 | 10 | 1.04323e-21 |
| Utricularia gibba | unitig_749 | 3 | CH_ugi_140 | 2 | 2 | 0.000820479 |
| Vitis vinifera | chr10 | 3 | CH_vvi_125 | 4 | 4 | 0.0000000313598 |
| Vitis vinifera | chr11 | 3 | CH_vvi_243 | 3 | 3 | 0.000031712 |
| Vitis vinifera | chr17 | 3 | CH_vvi_244 | 3 | 3 | 0.000031712 |
| Vitis vinifera | chr4 | 3 | CH_vvi_25 | 9 | 11 | 8.74496e-22 |
| Zea mays | 1 | 3 | CH_zma_72 | 4 | 5 | 0.0000000146632 |
| Zea mays | 8 | 3 | CH_zma_9 | 8 | 10 | 4.14097e-21 |
| Aethionema arabicum | LG-10 | 4 | CH_aar_26 | 5 | 5 | 0.000000000000240116 |
| Arabidopsis lyrata | scaffold_5 | 4 | CH_aly_135 | 3 | 3 | 0.00000297347 |
| Arabidopsis lyrata | scaffold_2 | 4 | CH_aly_136 | 3 | 3 | 0.00000297347 |
| Arabidopsis lyrata | scaffold_4 | 4 | CH_aly_161 | 3 | 4 | 0.0000118899 |
| Arabidopsis lyrata | scaffold_5 | 4 | CH_aly_180 | 3 | 5 | 0.000029715 |
| Arabidopsis thaliana | Chr3 | 4 | CH_ath_102 | 4 | 7 | 0.00000000336895 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_228 | 3 | 4 | 0.00000224043 |
| Arabidopsis thaliana | Chr3 | 4 | CH_ath_265 | 3 | 5 | 0.00000560027 |
| Brassica carinata | ChrC03 | 4 | CH_bca_141 | 4 | 4 | 0.00000000361652 |
| Brassica carinata | ChrC02 | 4 | CH_bca_47 | 6 | 11 | 0.0000000000002824 |
| Brassica carinata | ChrC08 | 4 | CH_bca_86 | 5 | 7 | 0.0000000000316367 |
| Brassica napus | A02 | 4 | CH_bna_185 | 4 | 6 | 0.000000113588 |
| Brassica napus | A04 | 4 | CH_bna_220 | 4 | 8 | 0.000000529651 |
| Brassica napus | C06 | 4 | CH_bna_351 | 4 | 16 | 0.0000137266 |
| Brassica napus | A07 | 4 | CH_bna_354 | 3 | 3 | 0.0000151218 |
| Brassica napus | C02 | 4 | CH_bna_355 | 3 | 3 | 0.0000151218 |
| Brassica napus | C06 | 4 | CH_bna_356 | 3 | 3 | 0.0000151218 |
| Brassica napus | C04 | 4 | CH_bna_62 | 6 | 13 | 0.00000000000307842 |
| Brassica oleracea | C4 | 4 | CH_bol_179 | 4 | 14 | 0.00000214022 |
| Brassica oleracea | C6 | 4 | CH_bol_196 | 3 | 3 | 0.00000525013 |
| Brassica rapa | A07 | 4 | CH_bra_125 | 3 | 3 | 0.00000425765 |
| Brassica rapa | A04 | 4 | CH_bra_151 | 3 | 4 | 0.000017025 |
| Camellia sinensis var. sinensis | Chr15 | 4 | CH_camsi_215 | 4 | 8 | 0.0000000276149 |
| Camellia sinensis var. sinensis | Chr13 | 4 | CH_camsi_260 | 5 | 46 | 0.000000135319 |
| Capsicum annuum | PGAv.1.6.scaffold803 | 4 | CH_can_124 | 4 | 6 | 0.00000000836853 |
| Corylus avellana | 1 | 4 | CH_cav_213 | 3 | 6 | 0.0000290748 |
| Coffea canephora | chr2 | 4 | CH_ccan_150 | 4 | 89 | 0.00000706235 |
| Coffea canephora | chr6 | 4 | CH_ccan_383 | 3 | 39 | 0.000666319 |
| Coffea canephora | chr4 | 4 | CH_ccan_64 | 4 | 17 | 0.0000000173441 |
| Citrus clementina | scaffold_2 | 4 | CH_ccl_118 | 6 | 25 | 0.00000000336115 |
| Citrus clementina | scaffold_1 | 4 | CH_ccl_141 | 4 | 4 | 0.00000002476 |
| Citrus clementina | scaffold_4 | 4 | CH_ccl_47 | 7 | 11 | 0.00000000000000519685 |
| Carpinus fangiana | Cfa02 | 4 | CH_cfa_147 | 3 | 3 | 0.00000189286 |
| Cardamine hirsuta | Chr5 | 4 | CH_chi_27 | 6 | 7 | 0.00000000000000461281 |
| Cardamine hirsuta | Chr2 | 4 | CH_chi_80 | 4 | 4 | 0.00000000303185 |
| Capsella rubella | scaffold_5 | 4 | CH_cru_14 | 7 | 8 | 3.06351e-18 |
| Capsella rubella | scaffold_5 | 4 | CH_cru_192 | 3 | 4 | 0.0000261626 |
| Capsella rubella | scaffold_2 | 4 | CH_cru_78 | 4 | 4 | 0.00000000358854 |
| Daucus carota | DCARv2_Chr6 | 4 | CH_dca_161 | 3 | 3 | 0.00000222097 |
| Daucus carota | DCARv2_Chr2 | 4 | CH_dca_162 | 3 | 3 | 0.00000222097 |
| Davidia involucrata | GWHABJS00000006 | 4 | CH_din_26 | 6 | 7 | 6.09887e-16 |
| Durio zibethinus | NW_019167960.1 | 4 | CH_dzi_178 | 3 | 5 | 0.0000117245 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 4 | CH_eca_190 | 3 | 4 | 0.00000439671 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 4 | CH_eca_45 | 5 | 12 | 0.0000000000481548 |
| Eucalyptus grandis | Chr10 | 4 | CH_egr_227 | 5 | 5 | 0.00000000000102348 |
| Eucalyptus grandis | Chr01 | 4 | CH_egr_575 | 3 | 3 | 0.00000497906 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_722 | 3 | 6 | 0.0000994675 |
| Eutrema salsugineum | scaffold_19 | 4 | CH_esa_42 | 4 | 4 | 0.00000000132621 |
| Eutrema salsugineum | scaffold_9 | 4 | CH_esa_43 | 4 | 4 | 0.00000000132621 |
| Fragaria vesca | Fvb1 | 4 | CH_fve_182 | 3 | 3 | 0.00000291523 |
| Gossypium hirsutum | A11 | 4 | CH_ghi_349 | 3 | 3 | 0.00000830981 |
| Lupinus albus | Lalb_Chr25 | 4 | CH_lal_132 | 3 | 3 | 0.000000495806 |
| Lonicera japonica | GWHAAZE00000005 | 4 | CH_lonja_33 | 10 | 11 | 1.01338e-25 |
| Lonicera japonica | GWHAAZE00000004 | 4 | CH_lonja_424 | 3 | 4 | 0.00012868 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_531 | 4 | 27 | 0.000515533 |
| Lonicera japonica | GWHAAZE00000009 | 4 | CH_lonja_62 | 7 | 7 | 1.95529e-17 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 4 | CH_lsa_289 | 3 | 5 | 0.000014419 |
| Magnolia biondii | Chr15 | 4 | CH_mbi_291 | 5 | 80 | 0.00000197755 |
| Medicago truncatula | chr7 | 4 | CH_mtr_124 | 5 | 6 | 0.00000000000681141 |
| Medicago truncatula | chr4 | 4 | CH_mtr_226 | 5 | 17 | 0.00000000699684 |
| Medicago truncatula | chr8 | 4 | CH_mtr_284 | 4 | 7 | 0.0000000920284 |
| Medicago truncatula | chr2 | 4 | CH_mtr_511 | 3 | 5 | 0.0000581983 |
| Punica granatum | NC_045132.1 | 4 | CH_pgr_243 | 3 | 7 | 0.0000649573 |
| Quercus lobata | 6 | 4 | CH_qlo_139 | 6 | 7 | 0.00000000000000107251 |
| Quercus lobata | 6 | 4 | CH_qlo_151 | 6 | 8 | 0.00000000000000428879 |
| Rhododendron simsii | chr08 | 4 | CH_rsi_250 | 3 | 3 | 0.00000137423 |
| Salvia bowleyana | GWHASIU00000002 | 4 | CH_sbo_245 | 3 | 6 | 0.00000347666 |
| Salix brachista | GWHAAZH00000015 | 4 | CH_sbr_6 | 12 | 38 | 2.03015e-25 |
| Sequoiadendron giganteum | chr4 | 4 | CH_sgi_702 | 3 | 3 | 0.000000783163 |
| Solanum lycopersicum | SL4.0ch03 | 4 | CH_sly_105 | 4 | 4 | 0.000000000607262 |
| Schrenkiella parvula | ch5-7 | 4 | CH_spa_24 | 4 | 4 | 0.00000000146586 |
| Schrenkiella parvula | ch5-1 | 4 | CH_spa_72 | 3 | 3 | 0.00000338481 |
| Solanum pennellii | Spenn-ch03 | 4 | CH_spe_178 | 3 | 3 | 0.00000108022 |
| Solanum tuberosum | ST4.03ch03 | 4 | CH_stu_301 | 3 | 4 | 0.00000716754 |
| Trochodendron aralioides | group4 | 4 | CH_tar_178 | 3 | 3 | 0.00000154633 |
| Theobroma cacao | Chromosome_2 | 4 | CH_tca_219 | 3 | 4 | 0.00000920191 |
| Theobroma cacao | Chromosome_5 | 4 | CH_tca_233 | 3 | 5 | 0.0000229976 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 4 | CH_tpr_232 | 3 | 9 | 0.0000865193 |
| Tripterygium wilfordii | NC_052251.1 | 4 | CH_twi_11 | 8 | 10 | 1.04323e-21 |
| Utricularia gibba | unitig_749 | 4 | CH_ugi_140 | 2 | 2 | 0.000820479 |
| Vitis vinifera | chr10 | 4 | CH_vvi_125 | 4 | 4 | 0.0000000313598 |
| Vitis vinifera | chr11 | 4 | CH_vvi_243 | 3 | 3 | 0.000031712 |
| Vitis vinifera | chr17 | 4 | CH_vvi_244 | 3 | 3 | 0.000031712 |
| Vitis vinifera | chr4 | 4 | CH_vvi_25 | 9 | 11 | 8.74496e-22 |
| Zea mays | 1 | 4 | CH_zma_72 | 4 | 5 | 0.0000000146632 |
| Zea mays | 8 | 4 | CH_zma_9 | 8 | 10 | 4.14097e-21 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |