Functional clusters

Information

  • Type Gene Ontology
  • Description delta12-fatty acid dehydrogenase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB06 3 CH_bca_681 2 3 0.000192384
Capsicum annuum PGAv.1.6.scaffold575 3 CH_can_6 12 16 4.74558e-35
Gossypium hirsutum A01 3 CH_ghi_580 2 2 0.000400523
Gossypium hirsutum D01 3 CH_ghi_581 2 2 0.000400523
Glycine max Gm19 3 CH_gma_397 2 2 0.000227734
Gossypium raimondii Chr02 3 CH_gra_264 2 2 0.000160832
Oryza sativa ssp. japonica chr07 3 CH_osa_356 2 2 0.000158437
Zea mays 10 3 CH_zma_332 2 2 0.000766969
Zea mays 5 3 CH_zma_333 2 2 0.000766969
Brassica carinata ChrB06 4 CH_bca_681 2 3 0.000192384
Capsicum annuum PGAv.1.6.scaffold575 4 CH_can_6 12 16 4.74558e-35
Gossypium hirsutum A01 4 CH_ghi_580 2 2 0.000400523
Gossypium hirsutum D01 4 CH_ghi_581 2 2 0.000400523
Glycine max Gm19 4 CH_gma_397 2 2 0.000227734
Gossypium raimondii Chr02 4 CH_gra_264 2 2 0.000160832
Oryza sativa ssp. japonica chr07 4 CH_osa_356 2 2 0.000158437
Zea mays 10 4 CH_zma_332 2 2 0.000766969
Zea mays 5 4 CH_zma_333 2 2 0.000766969

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001