Functional clusters
Information
- Type Gene Ontology
- Description oxidoreductase activity, acting on the CH-NH group of donors
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 3 | CH_arhy_588 | 3 | 4 | 0.000307135 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 3 | CH_arhy_589 | 3 | 4 | 0.000307135 |
Carya illinoinensis | Chr04 | 3 | CH_cil_516 | 3 | 6 | 0.000893363 |
Lupinus albus | Lalb_Chr07 | 3 | CH_lal_356 | 3 | 4 | 0.000483049 |
Solanum lycopersicum | SL4.0ch12 | 3 | CH_sly_238 | 4 | 7 | 0.00000237004 |
Vigna mungo | CM024074.1 | 3 | CH_vmu_289 | 3 | 5 | 0.000446411 |
Vanilla planifolia | CM028162.1 | 3 | CH_vpl_236 | 3 | 4 | 0.000147127 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 4 | CH_arhy_588 | 3 | 4 | 0.000307135 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 4 | CH_arhy_589 | 3 | 4 | 0.000307135 |
Carya illinoinensis | Chr04 | 4 | CH_cil_516 | 3 | 6 | 0.000893363 |
Lupinus albus | Lalb_Chr07 | 4 | CH_lal_356 | 3 | 4 | 0.000483049 |
Solanum lycopersicum | SL4.0ch12 | 4 | CH_sly_238 | 4 | 7 | 0.00000237004 |
Vigna mungo | CM024074.1 | 4 | CH_vmu_289 | 3 | 5 | 0.000446411 |
Vanilla planifolia | CM028162.1 | 4 | CH_vpl_236 | 3 | 4 | 0.000147127 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0004146 | dihydrofolate reductase activity | 6 |
GO:0004174 | electron-transferring-flavoprotein dehydrogenase activity | 12 |
GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | 26 |
GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | 6 |
GO:0004657 | proline dehydrogenase activity | 26 |
GO:0004735 | pyrroline-5-carboxylate reductase activity | 12 |
GO:0004753 | saccharopine dehydrogenase activity | 2 |
GO:0008115 | sarcosine oxidase activity | 22 |
GO:0010349 | L-galactose dehydrogenase activity | 4 |
GO:0019139 | cytokinin dehydrogenase activity | 18 |
GO:0052903 | N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity | 6 |
GO:0052904 | N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity | 26 |
GO:0062046 | dehydropipecolic acid reductase | 4 |
GO:1990534 | thermospermine oxidase activity | 2 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |