Functional clusters
Information
- Type Gene Ontology
- Description CCAAT-binding factor complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_1 | 3 | CH_aly_352 | 3 | 17 | 0.000974154 |
| Brassica carinata | ChrC03 | 3 | CH_bca_599 | 3 | 5 | 0.0000907174 |
| Brassica napus | C02 | 3 | CH_bna_432 | 3 | 5 | 0.0000592962 |
| Capsicum annuum | PGAv.1.6.scaffold623 | 3 | CH_can_75 | 5 | 5 | 0.00000000000299357 |
| Capsella rubella | scaffold_5 | 3 | CH_cru_202 | 3 | 6 | 0.0000458265 |
| Cucumis sativus L. | chr3 | 3 | CH_csa_37 | 5 | 5 | 0.000000000000288496 |
| Davidia involucrata | GWHABJS00000001 | 3 | CH_din_341 | 3 | 8 | 0.000371361 |
| Eucalyptus grandis | Chr02 | 3 | CH_egr_421 | 4 | 8 | 0.000000042103 |
| Erythranthe guttata | scaffold_14 | 3 | CH_egut_345 | 3 | 3 | 0.000220464 |
| Erythranthe guttata | scaffold_5 | 3 | CH_egut_352 | 4 | 13 | 0.000299967 |
| Erythranthe guttata | scaffold_2 | 3 | CH_egut_50 | 8 | 13 | 0.00000000000000620492 |
| Erythranthe guttata | scaffold_5 | 3 | CH_egut_73 | 9 | 45 | 0.00000000000712381 |
| Lonicera japonica | GWHAAZE00000005 | 3 | CH_lonja_32 | 10 | 13 | 6.56385e-26 |
| Medicago truncatula | chr5 | 3 | CH_mtr_747 | 3 | 13 | 0.000823263 |
| Phaseolus vulgaris | Chr06 | 3 | CH_pvu_193 | 3 | 3 | 0.0000124704 |
| Solanum lycopersicum | SL4.0ch07 | 3 | CH_sly_130 | 5 | 10 | 0.00000000530551 |
| Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_308 | 3 | 3 | 0.0000281946 |
| Solanum lycopersicum | SL4.0ch05 | 3 | CH_sly_82 | 6 | 12 | 0.0000000000159763 |
| Solanum pennellii | Spenn-ch05 | 3 | CH_spe_11 | 9 | 12 | 9.62384e-23 |
| Solanum pennellii | Spenn-ch07 | 3 | CH_spe_175 | 4 | 9 | 0.00000104405 |
| Solanum tuberosum | ST4.03ch05 | 3 | CH_stu_37 | 8 | 16 | 1.16553e-17 |
| Arabidopsis lyrata | scaffold_1 | 4 | CH_aly_352 | 3 | 17 | 0.000974154 |
| Brassica carinata | ChrC03 | 4 | CH_bca_599 | 3 | 5 | 0.0000907174 |
| Brassica napus | C02 | 4 | CH_bna_432 | 3 | 5 | 0.0000592962 |
| Capsicum annuum | PGAv.1.6.scaffold623 | 4 | CH_can_75 | 5 | 5 | 0.00000000000299357 |
| Capsella rubella | scaffold_5 | 4 | CH_cru_202 | 3 | 6 | 0.0000458265 |
| Cucumis sativus L. | chr3 | 4 | CH_csa_37 | 5 | 5 | 0.000000000000288496 |
| Davidia involucrata | GWHABJS00000001 | 4 | CH_din_341 | 3 | 8 | 0.000371361 |
| Eucalyptus grandis | Chr02 | 4 | CH_egr_421 | 4 | 8 | 0.000000042103 |
| Erythranthe guttata | scaffold_14 | 4 | CH_egut_345 | 3 | 3 | 0.000220464 |
| Erythranthe guttata | scaffold_5 | 4 | CH_egut_352 | 4 | 13 | 0.000299967 |
| Erythranthe guttata | scaffold_2 | 4 | CH_egut_50 | 8 | 13 | 0.00000000000000620492 |
| Erythranthe guttata | scaffold_5 | 4 | CH_egut_73 | 9 | 45 | 0.00000000000712381 |
| Lonicera japonica | GWHAAZE00000005 | 4 | CH_lonja_32 | 10 | 13 | 6.56385e-26 |
| Medicago truncatula | chr5 | 4 | CH_mtr_747 | 3 | 13 | 0.000823263 |
| Phaseolus vulgaris | Chr06 | 4 | CH_pvu_193 | 3 | 3 | 0.0000124704 |
| Solanum lycopersicum | SL4.0ch07 | 4 | CH_sly_130 | 5 | 10 | 0.00000000530551 |
| Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_308 | 3 | 3 | 0.0000281946 |
| Solanum lycopersicum | SL4.0ch05 | 4 | CH_sly_82 | 6 | 12 | 0.0000000000159763 |
| Solanum pennellii | Spenn-ch05 | 4 | CH_spe_11 | 9 | 12 | 9.62384e-23 |
| Solanum pennellii | Spenn-ch07 | 4 | CH_spe_175 | 4 | 9 | 0.00000104405 |
| Solanum tuberosum | ST4.03ch05 | 4 | CH_stu_37 | 8 | 16 | 1.16553e-17 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |