Functional clusters
Information
- Type Gene Ontology
- Description mediator complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 3 | CH_acertr_65 | 5 | 5 | 0.000000000644556 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 3 | CH_arhy_366 | 4 | 5 | 0.00000268242 |
| Ceratophyllum demersum | 2 | 3 | CH_cde_96 | 4 | 9 | 0.0000629977 |
| Medicago truncatula | chr2 | 3 | CH_mtr_293 | 4 | 4 | 0.000000132212 |
| Quercus lobata | 5 | 3 | CH_qlo_778 | 4 | 11 | 0.000103469 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_1062 | 3 | 3 | 0.000109842 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_383 | 6 | 11 | 0.000000000114823 |
| Sapria himalayana | scaffold117_961422 | 3 | CH_shi_137 | 3 | 3 | 0.0000448226 |
| Solanum lycopersicum | SL4.0ch10 | 3 | CH_sly_26 | 11 | 23 | 4.58203e-20 |
| Solanum pennellii | Spenn-ch10 | 3 | CH_spe_234 | 4 | 9 | 0.0000140441 |
| Solanum tuberosum | ST4.03ch10 | 3 | CH_stu_236 | 4 | 5 | 0.000000637766 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 3 | CH_tpr_53 | 5 | 6 | 0.00000000563587 |
| Acer truncatum | chr2 | 4 | CH_acertr_65 | 5 | 5 | 0.000000000644556 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 4 | CH_arhy_366 | 4 | 5 | 0.00000268242 |
| Ceratophyllum demersum | 2 | 4 | CH_cde_96 | 4 | 9 | 0.0000629977 |
| Medicago truncatula | chr2 | 4 | CH_mtr_293 | 4 | 4 | 0.000000132212 |
| Quercus lobata | 5 | 4 | CH_qlo_778 | 4 | 11 | 0.000103469 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_1062 | 3 | 3 | 0.000109842 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_383 | 6 | 11 | 0.000000000114823 |
| Sapria himalayana | scaffold117_961422 | 4 | CH_shi_137 | 3 | 3 | 0.0000448226 |
| Solanum lycopersicum | SL4.0ch10 | 4 | CH_sly_26 | 11 | 23 | 4.58203e-20 |
| Solanum pennellii | Spenn-ch10 | 4 | CH_spe_234 | 4 | 9 | 0.0000140441 |
| Solanum tuberosum | ST4.03ch10 | 4 | CH_stu_236 | 4 | 5 | 0.000000637766 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 4 | CH_tpr_53 | 5 | 6 | 0.00000000563587 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |