Functional clusters

Information

  • Type Gene Ontology
  • Description CoA-ligase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cardamine hirsuta Chr1 3 CH_chi_178 3 4 0.0000104314
Eutrema salsugineum scaffold_5 3 CH_esa_164 3 7 0.000110663
Sequoiadendron giganteum HRSCAF_1 3 CH_sgi_158 7 10 8.30058e-17
Schrenkiella parvula ch1-1 3 CH_spa_93 3 4 0.0000135343
Tarenaya hassleriana NW_010965372.1 3 CH_tha_141 3 8 0.000229067
Cardamine hirsuta Chr1 4 CH_chi_178 3 4 0.0000104314
Eutrema salsugineum scaffold_5 4 CH_esa_164 3 7 0.000110663
Sequoiadendron giganteum HRSCAF_1 4 CH_sgi_158 7 10 8.30058e-17
Schrenkiella parvula ch1-1 4 CH_spa_93 3 4 0.0000135343
Tarenaya hassleriana NW_010965372.1 4 CH_tha_141 3 8 0.000229067

Available child term results

Ontology identifier Description Number of clusters
GO:0008756 o-succinylbenzoate-CoA ligase activity 2
GO:0016207 4-coumarate-CoA ligase activity 10
GO:0018858 benzoate-CoA ligase activity 12
GO:0031957 very long-chain fatty acid-CoA ligase activity 4
GO:0047760 butyrate-CoA ligase activity 2
GO:0050203 oxalate-CoA ligase activity 2
GO:0106290 trans-cinnamate-CoA ligase activity 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001