Functional clusters

Information

  • Type Gene Ontology
  • Description phosphorylation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_2 3 CH_ccl_85 16 24 0.0000000000339759
Cucumis melo chr08 3 CH_cme_94 8 8 0.0000000953618
Daucus carota DCARv2_Chr8 3 CH_dca_231 11 23 0.0000603486
Eucalyptus grandis Chr08 3 CH_egr_278 22 41 0.0000000000248946
Malus domestica Chr12 3 CH_mdo_362 9 14 0.0000208844
Malus domestica Chr04 3 CH_mdo_658 16 70 0.000600169
Papaver somniferum NC_039358.1 3 CH_pso_318 16 77 0.00000143217
Quercus lobata 9 3 CH_qlo_560 18 45 0.00000293977
Sequoiadendron giganteum chr1 3 CH_sgi_769 12 25 0.00000257374
Solanum tuberosum ST4.03ch05 3 CH_stu_17 27 37 5.87723e-26
Citrus clementina scaffold_2 4 CH_ccl_85 16 24 0.0000000000339759
Cucumis melo chr08 4 CH_cme_94 8 8 0.0000000953618
Daucus carota DCARv2_Chr8 4 CH_dca_231 11 23 0.0000603486
Eucalyptus grandis Chr08 4 CH_egr_278 22 41 0.0000000000248946
Malus domestica Chr12 4 CH_mdo_362 9 14 0.0000208844
Malus domestica Chr04 4 CH_mdo_658 16 70 0.000600169
Papaver somniferum NC_039358.1 4 CH_pso_318 16 77 0.00000143217
Quercus lobata 9 4 CH_qlo_560 18 45 0.00000293977
Sequoiadendron giganteum chr1 4 CH_sgi_769 12 25 0.00000257374
Solanum tuberosum ST4.03ch05 4 CH_stu_17 27 37 5.87723e-26

Available child term results

Ontology identifier Description Number of clusters
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity 14
GO:0006096 glycolytic process 20
GO:0006110 regulation of glycolytic process 2
GO:0006468 protein phosphorylation 824
GO:0018108 peptidyl-tyrosine phosphorylation 6
GO:0032147 activation of protein kinase activity 10
GO:0033674 positive regulation of kinase activity 6
GO:0035407 histone H3-T11 phosphorylation 6
GO:0036289 peptidyl-serine autophosphorylation 2
GO:0043407 negative regulation of MAP kinase activity 2
GO:0043549 regulation of kinase activity 2
GO:0043987 histone H3-S10 phosphorylation 2
GO:0046777 protein autophosphorylation 12
GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation 2
GO:0052746 inositol phosphorylation 10
GO:0061866 negative regulation of histone H3-S10 phosphorylation 2
GO:0071900 regulation of protein serine/threonine kinase activity 8
GO:1901407 regulation of phosphorylation of RNA polymerase II C-terminal domain 2
GO:1990164 histone H2A phosphorylation 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001