Functional clusters

Information

  • Type Gene Ontology
  • Description RNA polymerase II general transcription initiation factor activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 3 CH_acertr_462 2 2 0.000422982
Actinidia chinensis Lachesis_group15 3 CH_ach_185 2 2 0.000162964
Corylus avellana 5 3 CH_cav_405 2 3 0.000689981
Cucumis melo chr01 3 CH_cme_245 2 2 0.000400267
Gossypium hirsutum D05 3 CH_ghi_239 3 5 0.000000213876
Gossypium raimondii Chr09 3 CH_gra_327 2 3 0.000482475
Lupinus albus Lalb_Chr20 3 CH_lal_96 4 26 0.000000032386
Medicago truncatula chr7 3 CH_mtr_574 2 2 0.000123259
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_180 4 8 0.000000000931068
Sequoiadendron giganteum chr4 3 CH_sgi_1135 2 2 0.000146145
Vitis vinifera chr12 3 CH_vvi_164 3 5 0.000000347102
Acer truncatum chr6 4 CH_acertr_462 2 2 0.000422982
Actinidia chinensis Lachesis_group15 4 CH_ach_185 2 2 0.000162964
Corylus avellana 5 4 CH_cav_405 2 3 0.000689981
Cucumis melo chr01 4 CH_cme_245 2 2 0.000400267
Gossypium hirsutum D05 4 CH_ghi_239 3 5 0.000000213876
Gossypium raimondii Chr09 4 CH_gra_327 2 3 0.000482475
Lupinus albus Lalb_Chr20 4 CH_lal_96 4 26 0.000000032386
Medicago truncatula chr7 4 CH_mtr_574 2 2 0.000123259
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_180 4 8 0.000000000931068
Sequoiadendron giganteum chr4 4 CH_sgi_1135 2 2 0.000146145
Vitis vinifera chr12 4 CH_vvi_164 3 5 0.000000347102

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001