Functional clusters
Information
- Type Gene Ontology
- Description iron-sulfur cluster assembly
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr8 | 3 | CH_camsi_718 | 3 | 5 | 0.000361584 |
| Daucus carota | DCARv2_Chr3 | 3 | CH_dca_149 | 4 | 6 | 0.000000958506 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_414 | 5 | 13 | 0.0000000267327 |
| Lupinus albus | Lalb_Chr20 | 3 | CH_lal_393 | 3 | 6 | 0.000695609 |
| Lotus japonicus | chr1 | 3 | CH_lja_208 | 3 | 3 | 0.000054766 |
| Lotus japonicus | chr1 | 3 | CH_lja_337 | 3 | 5 | 0.000546652 |
| Quercus lobata | 7 | 3 | CH_qlo_486 | 6 | 52 | 0.000000448591 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_389 | 4 | 8 | 0.00000359081 |
| Solanum lycopersicum | SL4.0ch09 | 3 | CH_sly_566 | 3 | 6 | 0.000869794 |
| Tripterygium wilfordii | NC_052244.1 | 3 | CH_twi_301 | 3 | 5 | 0.000535049 |
| Camellia sinensis var. sinensis | Chr8 | 4 | CH_camsi_718 | 3 | 5 | 0.000361584 |
| Daucus carota | DCARv2_Chr3 | 4 | CH_dca_149 | 4 | 6 | 0.000000958506 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_414 | 5 | 13 | 0.0000000267327 |
| Lupinus albus | Lalb_Chr20 | 4 | CH_lal_393 | 3 | 6 | 0.000695609 |
| Lotus japonicus | chr1 | 4 | CH_lja_208 | 3 | 3 | 0.000054766 |
| Lotus japonicus | chr1 | 4 | CH_lja_337 | 3 | 5 | 0.000546652 |
| Quercus lobata | 7 | 4 | CH_qlo_486 | 6 | 52 | 0.000000448591 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_389 | 4 | 8 | 0.00000359081 |
| Solanum lycopersicum | SL4.0ch09 | 4 | CH_sly_566 | 3 | 6 | 0.000869794 |
| Tripterygium wilfordii | NC_052244.1 | 4 | CH_twi_301 | 3 | 5 | 0.000535049 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0018283 | iron incorporation into metallo-sulfur cluster | 6 |
| GO:0044571 | [2Fe-2S] cluster assembly | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |