Functional clusters
Information
- Type Gene Ontology
- Description acyl-CoA desaturase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cucumis sativus L. | chr1 | 3 | CH_csa_131 | 3 | 3 | 0.00000380481 |
| Cucumis sativus L. | chr4 | 3 | CH_csa_9 | 7 | 7 | 9.15035e-20 |
| Fragaria x ananassa | Fvb6-1 | 3 | CH_fan_241 | 4 | 19 | 0.0000043235 |
| Fragaria x ananassa | Fvb6-3 | 3 | CH_fan_443 | 3 | 9 | 0.000307585 |
| Fragaria x ananassa | Fvb6-4 | 3 | CH_fan_514 | 3 | 11 | 0.000603897 |
| Fragaria vesca | Fvb6 | 3 | CH_fve_90 | 5 | 22 | 0.00000000305019 |
| Helianthus annuus | HanXRQChr04 | 3 | CH_han_342 | 4 | 13 | 0.00000184458 |
| Helianthus annuus | HanXRQChr10 | 3 | CH_han_350 | 4 | 14 | 0.00000258148 |
| Lonicera japonica | GWHAAZE00000002 | 3 | CH_lonja_107 | 6 | 20 | 0.00000000000030978 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 3 | CH_lsa_108 | 5 | 12 | 0.000000000256106 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 3 | CH_lsa_214 | 4 | 12 | 0.000000478878 |
| Malus domestica | Chr09 | 3 | CH_mdo_278 | 3 | 3 | 0.00000120796 |
| Prunus persica | Pp03 | 3 | CH_ppe_160 | 4 | 4 | 0.00000000745392 |
| Prunus persica | Pp04 | 3 | CH_ppe_73 | 6 | 9 | 0.000000000000236617 |
| Papaver somniferum | NC_039363.1 | 3 | CH_pso_219 | 4 | 7 | 0.0000000284987 |
| Papaver somniferum | NC_039358.1 | 3 | CH_pso_82 | 5 | 5 | 0.000000000000229477 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_267 | 6 | 42 | 0.0000000819089 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_668 | 3 | 5 | 0.000315325 |
| Sechium edule | LG06 | 3 | CH_sed_38 | 5 | 5 | 0.0000000000012025 |
| Sechium edule | LG05 | 3 | CH_sed_39 | 5 | 5 | 0.0000000000012025 |
| Cucumis sativus L. | chr1 | 4 | CH_csa_131 | 3 | 3 | 0.00000380481 |
| Cucumis sativus L. | chr4 | 4 | CH_csa_9 | 7 | 7 | 9.15035e-20 |
| Fragaria x ananassa | Fvb6-1 | 4 | CH_fan_241 | 4 | 19 | 0.0000043235 |
| Fragaria x ananassa | Fvb6-3 | 4 | CH_fan_443 | 3 | 9 | 0.000307585 |
| Fragaria x ananassa | Fvb6-4 | 4 | CH_fan_514 | 3 | 11 | 0.000603897 |
| Fragaria vesca | Fvb6 | 4 | CH_fve_90 | 5 | 22 | 0.00000000305019 |
| Helianthus annuus | HanXRQChr04 | 4 | CH_han_342 | 4 | 13 | 0.00000184458 |
| Helianthus annuus | HanXRQChr10 | 4 | CH_han_350 | 4 | 14 | 0.00000258148 |
| Lonicera japonica | GWHAAZE00000002 | 4 | CH_lonja_107 | 6 | 20 | 0.00000000000030978 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 4 | CH_lsa_108 | 5 | 12 | 0.000000000256106 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 4 | CH_lsa_214 | 4 | 12 | 0.000000478878 |
| Malus domestica | Chr09 | 4 | CH_mdo_278 | 3 | 3 | 0.00000120796 |
| Prunus persica | Pp03 | 4 | CH_ppe_160 | 4 | 4 | 0.00000000745392 |
| Prunus persica | Pp04 | 4 | CH_ppe_73 | 6 | 9 | 0.000000000000236617 |
| Papaver somniferum | NC_039363.1 | 4 | CH_pso_219 | 4 | 7 | 0.0000000284987 |
| Papaver somniferum | NC_039358.1 | 4 | CH_pso_82 | 5 | 5 | 0.000000000000229477 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_267 | 6 | 42 | 0.0000000819089 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_668 | 3 | 5 | 0.000315325 |
| Sechium edule | LG06 | 4 | CH_sed_38 | 5 | 5 | 0.0000000000012025 |
| Sechium edule | LG05 | 4 | CH_sed_39 | 5 | 5 | 0.0000000000012025 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0004768 | stearoyl-CoA 9-desaturase activity | 18 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |