Functional clusters
Information
- Type Gene Ontology
- Description chlorophyll binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-6 | 3 | CH_aar_244 | 2 | 2 | 0.000547395 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 3 | CH_bvu_245 | 3 | 6 | 0.000600087 |
| Chara braunii | BFEA01000209 | 3 | CH_cbr_6 | 8 | 22 | 1.25728e-16 |
| Capsella rubella | scaffold_1 | 3 | CH_cru_141 | 3 | 3 | 0.000000962292 |
| Fragaria x ananassa | Fvb5-4 | 3 | CH_fan_156 | 3 | 3 | 0.000000233679 |
| Lupinus albus | Lalb_Chr01 | 3 | CH_lal_153 | 4 | 5 | 0.00000156083 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 3 | CH_lsa_312 | 3 | 3 | 0.0000307936 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 3 | CH_lsa_313 | 3 | 3 | 0.0000307936 |
| Quercus lobata | 5 | 3 | CH_qlo_602 | 3 | 3 | 0.00000615756 |
| Solanum pennellii | Spenn-ch01 | 3 | CH_spe_448 | 3 | 9 | 0.000727303 |
| Selenicereus undatus | Scaffold_33675 | 3 | CH_sun_205 | 3 | 3 | 0.000492614 |
| Aethionema arabicum | LG-6 | 4 | CH_aar_244 | 2 | 2 | 0.000547395 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 4 | CH_bvu_245 | 3 | 6 | 0.000600087 |
| Chara braunii | BFEA01000209 | 4 | CH_cbr_6 | 8 | 22 | 1.25728e-16 |
| Capsella rubella | scaffold_1 | 4 | CH_cru_141 | 3 | 3 | 0.000000962292 |
| Fragaria x ananassa | Fvb5-4 | 4 | CH_fan_156 | 3 | 3 | 0.000000233679 |
| Lupinus albus | Lalb_Chr01 | 4 | CH_lal_153 | 4 | 5 | 0.00000156083 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 4 | CH_lsa_312 | 3 | 3 | 0.0000307936 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 4 | CH_lsa_313 | 3 | 3 | 0.0000307936 |
| Quercus lobata | 5 | 4 | CH_qlo_602 | 3 | 3 | 0.00000615756 |
| Solanum pennellii | Spenn-ch01 | 4 | CH_spe_448 | 3 | 9 | 0.000727303 |
| Selenicereus undatus | Scaffold_33675 | 4 | CH_sun_205 | 3 | 3 | 0.000492614 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |