Functional clusters

Information

  • Type Gene Ontology
  • Description methylammonium transport

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB01 3 CH_bca_551 2 2 0.0000641293
Beta vulgaris Chr4_EL10_PGA_scaffold1 3 CH_bvu_257 2 5 0.000827815
Capsicum annuum PGAv.1.6.scaffold4 3 CH_can_299 2 2 0.0000826105
Cucumis melo chr05 3 CH_cme_232 2 4 0.00040024
Chenopodium quinoa C_Quinoa_Scaffold_2088 3 CH_cqu_430 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_3429 3 CH_cqu_431 2 2 0.000284293
Cucumis sativus L. chr2 3 CH_csa_218 2 3 0.000250417
Erigeron canadensis Conyza_canadensis_scaffold:6 3 CH_eca_312 2 3 0.000134614
Erythranthe guttata scaffold_6 3 CH_egut_342 2 2 0.000218444
Glycine max Gm10 3 CH_gma_131 3 5 0.0000000216091
Lactuca sativa Lsat_1_v8_lg_2 3 CH_lsa_327 2 2 0.0000514007
Marchantia polymorpha scaffold_81 3 CH_mpo_28 4 6 0.00000000424217
Marchantia polymorpha scaffold_77 3 CH_mpo_59 3 4 0.00000409751
Oryza sativa ssp. japonica chr02 3 CH_osa_419 2 4 0.000475289
Physcomitrium patens Chr18 3 CH_ppa_205 2 2 0.000612726
Schrenkiella parvula ch3-2 3 CH_spa_185 2 2 0.000472404
Theobroma cacao Chromosome_5 3 CH_tca_273 2 2 0.0000732386
Brassica carinata ChrB01 4 CH_bca_551 2 2 0.0000641293
Beta vulgaris Chr4_EL10_PGA_scaffold1 4 CH_bvu_257 2 5 0.000827815
Capsicum annuum PGAv.1.6.scaffold4 4 CH_can_299 2 2 0.0000826105
Cucumis melo chr05 4 CH_cme_232 2 4 0.00040024
Chenopodium quinoa C_Quinoa_Scaffold_2088 4 CH_cqu_430 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_3429 4 CH_cqu_431 2 2 0.000284293
Cucumis sativus L. chr2 4 CH_csa_218 2 3 0.000250417
Erigeron canadensis Conyza_canadensis_scaffold:6 4 CH_eca_312 2 3 0.000134614
Erythranthe guttata scaffold_6 4 CH_egut_342 2 2 0.000218444
Glycine max Gm10 4 CH_gma_131 3 5 0.0000000216091
Lactuca sativa Lsat_1_v8_lg_2 4 CH_lsa_327 2 2 0.0000514007
Marchantia polymorpha scaffold_81 4 CH_mpo_28 4 6 0.00000000424217
Marchantia polymorpha scaffold_77 4 CH_mpo_59 3 4 0.00000409751
Oryza sativa ssp. japonica chr02 4 CH_osa_419 2 4 0.000475289
Physcomitrium patens Chr18 4 CH_ppa_205 2 2 0.000612726
Schrenkiella parvula ch3-2 4 CH_spa_185 2 2 0.000472404
Theobroma cacao Chromosome_5 4 CH_tca_273 2 2 0.0000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001