Functional clusters

Information

  • Type Gene Ontology
  • Description cadaverine transport

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_4119_HRSCAF_4138 3 CH_ama_124 2 2 0.000862218
Amborella trichopoda AmTr_v1.0_scaffold00048 3 CH_atr_257 2 2 0.000238322
Brassica carinata ChrC06 3 CH_bca_680 2 3 0.000192384
Citrus clementina scaffold_5 3 CH_ccl_56 6 20 0.0000000000000226606
Hydrangea macrophylla Hma1.2p1_0196F.1 3 CH_hma_262 2 2 0.000333259
Nelumbo nucifera chr1 3 CH_nnu_229 2 2 0.000144505
Quercus lobata 4 3 CH_qlo_44 11 58 4.33272e-25
Trochodendron aralioides group15 3 CH_tar_48 4 6 0.0000000000486882
Tarenaya hassleriana NW_010965451.1 3 CH_tha_163 2 2 0.000419082
Vitis vinifera chr2 3 CH_vvi_149 3 3 0.000000086787
Avicennia marina ScioBoG_4119_HRSCAF_4138 4 CH_ama_124 2 2 0.000862218
Amborella trichopoda AmTr_v1.0_scaffold00048 4 CH_atr_257 2 2 0.000238322
Brassica carinata ChrC06 4 CH_bca_680 2 3 0.000192384
Citrus clementina scaffold_5 4 CH_ccl_56 6 20 0.0000000000000226606
Hydrangea macrophylla Hma1.2p1_0196F.1 4 CH_hma_262 2 2 0.000333259
Nelumbo nucifera chr1 4 CH_nnu_229 2 2 0.000144505
Quercus lobata 4 4 CH_qlo_44 11 58 4.33272e-25
Trochodendron aralioides group15 4 CH_tar_48 4 6 0.0000000000486882
Tarenaya hassleriana NW_010965451.1 4 CH_tha_163 2 2 0.000419082
Vitis vinifera chr2 4 CH_vvi_149 3 3 0.000000086787

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001