Functional clusters

Information

  • Type Gene Ontology
  • Description proline transport

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C4 3 CH_bol_353 2 2 0.000490292
Brassica rapa A05 3 CH_bra_282 2 2 0.00064397
Capsicum annuum PGAv.1.6.scaffold503 3 CH_can_291 2 2 0.0000826105
Cucumis melo chr10 3 CH_cme_266 2 5 0.000667045
Daucus carota DCARv2_Chr7 3 CH_dca_291 2 2 0.000191333
Hydrangea macrophylla Hma1.2p1_0710F.1 3 CH_hma_290 2 2 0.000666519
Nicotiana tabacum Nitab4.5_0000278 3 CH_nta_35 3 4 0.00000028895
Petunia axillaris Peaxi162Scf00951 3 CH_pax_332 2 2 0.000703556
Punica granatum NC_045128.1 3 CH_pgr_142 3 6 0.000000168898
Quercus lobata 10 3 CH_qlo_815 2 3 0.000154883
Solanum lycopersicum SL4.0ch05 3 CH_sly_486 2 2 0.000352164
Schrenkiella parvula ch4-6 3 CH_spa_152 2 2 0.000236202
Solanum pennellii Spenn-ch05 3 CH_spe_376 2 2 0.000266874
Solanum pennellii Spenn-ch03 3 CH_spe_457 2 3 0.000800581
Solanum tuberosum ST4.03ch03 3 CH_stu_538 2 2 0.000307472
Solanum tuberosum ST4.03ch05 3 CH_stu_539 2 2 0.000307472
Brassica oleracea C4 4 CH_bol_353 2 2 0.000490292
Brassica rapa A05 4 CH_bra_282 2 2 0.00064397
Capsicum annuum PGAv.1.6.scaffold503 4 CH_can_291 2 2 0.0000826105
Cucumis melo chr10 4 CH_cme_266 2 5 0.000667045
Daucus carota DCARv2_Chr7 4 CH_dca_291 2 2 0.000191333
Hydrangea macrophylla Hma1.2p1_0710F.1 4 CH_hma_290 2 2 0.000666519
Nicotiana tabacum Nitab4.5_0000278 4 CH_nta_35 3 4 0.00000028895
Petunia axillaris Peaxi162Scf00951 4 CH_pax_332 2 2 0.000703556
Punica granatum NC_045128.1 4 CH_pgr_142 3 6 0.000000168898
Quercus lobata 10 4 CH_qlo_815 2 3 0.000154883
Solanum lycopersicum SL4.0ch05 4 CH_sly_486 2 2 0.000352164
Schrenkiella parvula ch4-6 4 CH_spa_152 2 2 0.000236202
Solanum pennellii Spenn-ch05 4 CH_spe_376 2 2 0.000266874
Solanum pennellii Spenn-ch03 4 CH_spe_457 2 3 0.000800581
Solanum tuberosum ST4.03ch03 4 CH_stu_538 2 2 0.000307472
Solanum tuberosum ST4.03ch05 4 CH_stu_539 2 2 0.000307472

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001