Functional clusters
Information
- Type Gene Ontology
- Description sucrose transport
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group28 | 3 | CH_ach_150 | 3 | 10 | 0.000116683 |
| Capsicum annuum | PGAv.1.6.scaffold758 | 3 | CH_can_87 | 4 | 4 | 0.0000000000592037 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4250 | 3 | CH_cqu_220 | 3 | 3 | 0.0000018859 |
| Durio zibethinus | NW_019168004.1 | 3 | CH_dzi_152 | 3 | 4 | 0.0000036857 |
| Helianthus annuus | HanXRQChr16 | 3 | CH_han_169 | 5 | 14 | 0.00000000112361 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 3 | CH_lsa_274 | 3 | 6 | 0.00000950696 |
| Manihot esculenta | Chromosome14 | 3 | CH_mes_206 | 3 | 3 | 0.00000203593 |
| Simmondsia chinensis | GWHAASQ00000023 | 3 | CH_sci_95 | 3 | 3 | 0.00000239236 |
| Selenicereus undatus | Scaffold_10417 | 3 | CH_sun_23 | 5 | 19 | 0.000000000611214 |
| Theobroma cacao | Chromosome_8 | 3 | CH_tca_103 | 4 | 5 | 0.00000000194432 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_148 | 3 | 3 | 0.00000213722 |
| Actinidia chinensis | Lachesis_group28 | 4 | CH_ach_150 | 3 | 10 | 0.000116683 |
| Capsicum annuum | PGAv.1.6.scaffold758 | 4 | CH_can_87 | 4 | 4 | 0.0000000000592037 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4250 | 4 | CH_cqu_220 | 3 | 3 | 0.0000018859 |
| Durio zibethinus | NW_019168004.1 | 4 | CH_dzi_152 | 3 | 4 | 0.0000036857 |
| Helianthus annuus | HanXRQChr16 | 4 | CH_han_169 | 5 | 14 | 0.00000000112361 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 4 | CH_lsa_274 | 3 | 6 | 0.00000950696 |
| Manihot esculenta | Chromosome14 | 4 | CH_mes_206 | 3 | 3 | 0.00000203593 |
| Simmondsia chinensis | GWHAASQ00000023 | 4 | CH_sci_95 | 3 | 3 | 0.00000239236 |
| Selenicereus undatus | Scaffold_10417 | 4 | CH_sun_23 | 5 | 19 | 0.000000000611214 |
| Theobroma cacao | Chromosome_8 | 4 | CH_tca_103 | 4 | 5 | 0.00000000194432 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_148 | 3 | 3 | 0.00000213722 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0009915 | phloem sucrose loading | 2 |
| GO:0110128 | phloem sucrose unloading | 6 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |