Functional clusters
Information
- Type Gene Ontology
- Description malate transport
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr3 | 3 | CH_acertr_251 | 3 | 4 | 0.0000166929 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_8 | 3 | CH_amhyb_59 | 4 | 12 | 0.000000437376 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 3 | CH_arhy_423 | 3 | 3 | 0.0000190781 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 3 | CH_arhy_424 | 3 | 3 | 0.0000190781 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 3 | CH_arhy_425 | 3 | 3 | 0.0000190781 |
| Brassica carinata | ChrC07 | 3 | CH_bca_137 | 4 | 4 | 0.00000000296771 |
| Brassica carinata | ChrB06 | 3 | CH_bca_408 | 3 | 3 | 0.00000730674 |
| Brassica carinata | ChrB03 | 3 | CH_bca_409 | 3 | 3 | 0.00000730674 |
| Brassica napus | C08 | 3 | CH_bna_148 | 4 | 5 | 0.0000000130186 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 3 | CH_bvu_191 | 3 | 8 | 0.0000948693 |
| Camellia sinensis var. sinensis | Chr11 | 3 | CH_camsi_166 | 5 | 15 | 0.00000000333881 |
| Capsicum annuum | PGAv.1.6.scaffold574 | 3 | CH_can_44 | 7 | 9 | 1.5359e-16 |
| Corylus avellana | 6 | 3 | CH_cav_120 | 4 | 8 | 0.000000289098 |
| Corylus avellana | 4 | 3 | CH_cav_141 | 4 | 10 | 0.000000866483 |
| Citrus clementina | scaffold_8 | 3 | CH_ccl_114 | 4 | 4 | 0.0000000022607 |
| Carpinus fangiana | Cfa04 | 3 | CH_cfa_99 | 4 | 7 | 0.0000000621972 |
| Carya illinoinensis | Chr13 | 3 | CH_cil_27 | 9 | 12 | 4.68863e-22 |
| Citrullus lanatus | CG_Chr03 | 3 | CH_cla_93 | 3 | 5 | 0.0000429353 |
| Cucumis melo | chr02 | 3 | CH_cme_107 | 4 | 11 | 0.000000400325 |
| Corchorus olitorius | AWUE01013496.1 | 3 | CH_col_46 | 3 | 3 | 0.00000448004 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2465 | 3 | CH_cqu_262 | 3 | 3 | 0.00000774566 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 3 | CH_cqu_263 | 3 | 3 | 0.00000774566 |
| Cucumis sativus L. | chr1 | 3 | CH_csa_39 | 5 | 5 | 0.00000000000109388 |
| Davidia involucrata | GWHABJS00000007 | 3 | CH_din_21 | 7 | 9 | 7.5634e-18 |
| Eucalyptus grandis | Chr10 | 3 | CH_egr_251 | 5 | 6 | 0.00000000000613863 |
| Eucalyptus grandis | Chr05 | 3 | CH_egr_663 | 3 | 5 | 0.0000497527 |
| Erythranthe guttata | scaffold_14 | 3 | CH_egut_390 | 3 | 7 | 0.000491834 |
| Fragaria x ananassa | Fvb3-4 | 3 | CH_fan_184 | 4 | 7 | 0.000000540968 |
| Fragaria x ananassa | Fvb3-2 | 3 | CH_fan_311 | 3 | 3 | 0.0000257386 |
| Fragaria vesca | Fvb3 | 3 | CH_fve_158 | 4 | 10 | 0.000000768941 |
| Fragaria vesca | Fvb4 | 3 | CH_fve_263 | 3 | 5 | 0.0000691775 |
| Glycine max | Gm20 | 3 | CH_gma_254 | 3 | 3 | 0.0000167909 |
| Helianthus annuus | HanXRQChr16 | 3 | CH_han_361 | 3 | 3 | 0.00000344952 |
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_128 | 5 | 6 | 0.00000000000672935 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 3 | CH_lsa_295 | 3 | 4 | 0.0000180656 |
| Magnolia biondii | Chr04 | 3 | CH_mbi_33 | 7 | 10 | 2.11338e-17 |
| Malus domestica | Chr03 | 3 | CH_mdo_421 | 3 | 4 | 0.0000470548 |
| Malus domestica | Chr16 | 3 | CH_mdo_422 | 3 | 4 | 0.0000470548 |
| Medicago truncatula | chr8 | 3 | CH_mtr_404 | 3 | 3 | 0.00000582402 |
| Medicago truncatula | chr1 | 3 | CH_mtr_766 | 3 | 11 | 0.000958202 |
| Olea europaea | chr12 | 3 | CH_oeu_44 | 4 | 5 | 0.0000000136499 |
| Prunus persica | Pp06 | 3 | CH_ppe_248 | 3 | 3 | 0.00000379798 |
| Papaver somniferum | NC_039368.1 | 3 | CH_pso_469 | 4 | 31 | 0.0000707019 |
| Papaver somniferum | NC_039366.1 | 3 | CH_pso_581 | 3 | 8 | 0.000330792 |
| Populus trichocarpa | Chr01 | 3 | CH_ptr_172 | 4 | 5 | 0.000000025639 |
| Quercus lobata | 1 | 3 | CH_qlo_31 | 10 | 12 | 2.39168e-27 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_70 | 8 | 24 | 8.1867e-17 |
| Salvia bowleyana | GWHASIU00000003 | 3 | CH_sbo_261 | 3 | 3 | 0.00000549925 |
| Salvia bowleyana | GWHASIU00000002 | 3 | CH_sbo_431 | 3 | 8 | 0.000307398 |
| Salix brachista | GWHAAZH00000016 | 3 | CH_sbr_85 | 4 | 4 | 0.00000000363719 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_228 | 6 | 9 | 0.0000000000000522982 |
| Sequoiadendron giganteum | chr8 | 3 | CH_sgi_821 | 3 | 3 | 0.00000630447 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_83 | 9 | 12 | 8.08062e-24 |
| Solanum tuberosum | ST4.03ch01 | 3 | CH_stu_146 | 4 | 4 | 0.00000000123548 |
| Theobroma cacao | Chromosome_9 | 3 | CH_tca_124 | 4 | 6 | 0.0000000241158 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 3 | CH_tpr_19 | 6 | 7 | 0.0000000000000693079 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 3 | CH_tpr_258 | 3 | 5 | 0.000197434 |
| Vitis vinifera | chr13 | 3 | CH_vvi_257 | 3 | 5 | 0.0000707522 |
| Acer truncatum | chr3 | 4 | CH_acertr_251 | 3 | 4 | 0.0000166929 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_8 | 4 | CH_amhyb_59 | 4 | 12 | 0.000000437376 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 4 | CH_arhy_423 | 3 | 3 | 0.0000190781 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 4 | CH_arhy_424 | 3 | 3 | 0.0000190781 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 4 | CH_arhy_425 | 3 | 3 | 0.0000190781 |
| Brassica carinata | ChrC07 | 4 | CH_bca_137 | 4 | 4 | 0.00000000296771 |
| Brassica carinata | ChrB06 | 4 | CH_bca_408 | 3 | 3 | 0.00000730674 |
| Brassica carinata | ChrB03 | 4 | CH_bca_409 | 3 | 3 | 0.00000730674 |
| Brassica napus | C08 | 4 | CH_bna_148 | 4 | 5 | 0.0000000130186 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 4 | CH_bvu_191 | 3 | 8 | 0.0000948693 |
| Camellia sinensis var. sinensis | Chr11 | 4 | CH_camsi_166 | 5 | 15 | 0.00000000333881 |
| Capsicum annuum | PGAv.1.6.scaffold574 | 4 | CH_can_44 | 7 | 9 | 1.5359e-16 |
| Corylus avellana | 6 | 4 | CH_cav_120 | 4 | 8 | 0.000000289098 |
| Corylus avellana | 4 | 4 | CH_cav_141 | 4 | 10 | 0.000000866483 |
| Citrus clementina | scaffold_8 | 4 | CH_ccl_114 | 4 | 4 | 0.0000000022607 |
| Carpinus fangiana | Cfa04 | 4 | CH_cfa_99 | 4 | 7 | 0.0000000621972 |
| Carya illinoinensis | Chr13 | 4 | CH_cil_27 | 9 | 12 | 4.68863e-22 |
| Citrullus lanatus | CG_Chr03 | 4 | CH_cla_93 | 3 | 5 | 0.0000429353 |
| Cucumis melo | chr02 | 4 | CH_cme_107 | 4 | 11 | 0.000000400325 |
| Corchorus olitorius | AWUE01013496.1 | 4 | CH_col_46 | 3 | 3 | 0.00000448004 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2465 | 4 | CH_cqu_262 | 3 | 3 | 0.00000774566 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 4 | CH_cqu_263 | 3 | 3 | 0.00000774566 |
| Cucumis sativus L. | chr1 | 4 | CH_csa_39 | 5 | 5 | 0.00000000000109388 |
| Davidia involucrata | GWHABJS00000007 | 4 | CH_din_21 | 7 | 9 | 7.5634e-18 |
| Eucalyptus grandis | Chr10 | 4 | CH_egr_251 | 5 | 6 | 0.00000000000613863 |
| Eucalyptus grandis | Chr05 | 4 | CH_egr_663 | 3 | 5 | 0.0000497527 |
| Erythranthe guttata | scaffold_14 | 4 | CH_egut_390 | 3 | 7 | 0.000491834 |
| Fragaria x ananassa | Fvb3-4 | 4 | CH_fan_184 | 4 | 7 | 0.000000540968 |
| Fragaria x ananassa | Fvb3-2 | 4 | CH_fan_311 | 3 | 3 | 0.0000257386 |
| Fragaria vesca | Fvb3 | 4 | CH_fve_158 | 4 | 10 | 0.000000768941 |
| Fragaria vesca | Fvb4 | 4 | CH_fve_263 | 3 | 5 | 0.0000691775 |
| Glycine max | Gm20 | 4 | CH_gma_254 | 3 | 3 | 0.0000167909 |
| Helianthus annuus | HanXRQChr16 | 4 | CH_han_361 | 3 | 3 | 0.00000344952 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_128 | 5 | 6 | 0.00000000000672935 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 4 | CH_lsa_295 | 3 | 4 | 0.0000180656 |
| Magnolia biondii | Chr04 | 4 | CH_mbi_33 | 7 | 10 | 2.11338e-17 |
| Malus domestica | Chr03 | 4 | CH_mdo_421 | 3 | 4 | 0.0000470548 |
| Malus domestica | Chr16 | 4 | CH_mdo_422 | 3 | 4 | 0.0000470548 |
| Medicago truncatula | chr8 | 4 | CH_mtr_404 | 3 | 3 | 0.00000582402 |
| Medicago truncatula | chr1 | 4 | CH_mtr_766 | 3 | 11 | 0.000958202 |
| Olea europaea | chr12 | 4 | CH_oeu_44 | 4 | 5 | 0.0000000136499 |
| Prunus persica | Pp06 | 4 | CH_ppe_248 | 3 | 3 | 0.00000379798 |
| Papaver somniferum | NC_039368.1 | 4 | CH_pso_469 | 4 | 31 | 0.0000707019 |
| Papaver somniferum | NC_039366.1 | 4 | CH_pso_581 | 3 | 8 | 0.000330792 |
| Populus trichocarpa | Chr01 | 4 | CH_ptr_172 | 4 | 5 | 0.000000025639 |
| Quercus lobata | 1 | 4 | CH_qlo_31 | 10 | 12 | 2.39168e-27 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_70 | 8 | 24 | 8.1867e-17 |
| Salvia bowleyana | GWHASIU00000003 | 4 | CH_sbo_261 | 3 | 3 | 0.00000549925 |
| Salvia bowleyana | GWHASIU00000002 | 4 | CH_sbo_431 | 3 | 8 | 0.000307398 |
| Salix brachista | GWHAAZH00000016 | 4 | CH_sbr_85 | 4 | 4 | 0.00000000363719 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_228 | 6 | 9 | 0.0000000000000522982 |
| Sequoiadendron giganteum | chr8 | 4 | CH_sgi_821 | 3 | 3 | 0.00000630447 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_83 | 9 | 12 | 8.08062e-24 |
| Solanum tuberosum | ST4.03ch01 | 4 | CH_stu_146 | 4 | 4 | 0.00000000123548 |
| Theobroma cacao | Chromosome_9 | 4 | CH_tca_124 | 4 | 6 | 0.0000000241158 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 4 | CH_tpr_19 | 6 | 7 | 0.0000000000000693079 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 4 | CH_tpr_258 | 3 | 5 | 0.000197434 |
| Vitis vinifera | chr13 | 4 | CH_vvi_257 | 3 | 5 | 0.0000707522 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0071423 | malate transmembrane transport | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |