Functional clusters
Information
- Type Gene Ontology
- Description aluminum cation transport
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr13 | 3 | CH_acertr_115 | 3 | 3 | 0.00000002982 |
| Camellia sinensis var. sinensis | Chr4 | 3 | CH_camsi_301 | 3 | 7 | 0.000000441497 |
| Cicer arietinum L. | Ca_LG5_v3 | 3 | CH_car_196 | 3 | 47 | 0.000587595 |
| Ceratophyllum demersum | 1 | 3 | CH_cde_13 | 4 | 5 | 0.000000000036951 |
| Daucus carota | DCARv2_Chr4 | 3 | CH_dca_382 | 2 | 2 | 0.000637775 |
| Durio zibethinus | NW_019167826.1 | 3 | CH_dzi_85 | 3 | 3 | 0.0000000128896 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 3 | CH_lsa_176 | 3 | 4 | 0.0000000634075 |
| Marchantia polymorpha | scaffold_203 | 3 | CH_mpo_36 | 4 | 7 | 0.0000000296804 |
| Punica granatum | NC_045130.1 | 3 | CH_pgr_368 | 2 | 3 | 0.000675279 |
| Pisum sativum | chr5LG3 | 3 | CH_psa_275 | 2 | 2 | 0.00015649 |
| Phaseolus vulgaris | Chr03 | 3 | CH_pvu_175 | 3 | 11 | 0.0000053417 |
| Quercus lobata | 9 | 3 | CH_qlo_49 | 8 | 14 | 8.32657e-24 |
| Salix brachista | GWHAAZH00000002 | 3 | CH_sbr_356 | 2 | 2 | 0.00063014 |
| Salix brachista | GWHAAZH00000005 | 3 | CH_sbr_357 | 2 | 2 | 0.00063014 |
| Selaginella moellendorffii | scaffold_7 | 3 | CH_smo_124 | 3 | 15 | 0.000118791 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 3 | CH_tpr_277 | 2 | 2 | 0.000227092 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_388 | 2 | 2 | 0.000929238 |
| Vitis vinifera | chr18 | 3 | CH_vvi_134 | 3 | 3 | 0.0000000347148 |
| Acer truncatum | chr13 | 4 | CH_acertr_115 | 3 | 3 | 0.00000002982 |
| Camellia sinensis var. sinensis | Chr4 | 4 | CH_camsi_301 | 3 | 7 | 0.000000441497 |
| Cicer arietinum L. | Ca_LG5_v3 | 4 | CH_car_196 | 3 | 47 | 0.000587595 |
| Ceratophyllum demersum | 1 | 4 | CH_cde_13 | 4 | 5 | 0.000000000036951 |
| Daucus carota | DCARv2_Chr4 | 4 | CH_dca_382 | 2 | 2 | 0.000637775 |
| Durio zibethinus | NW_019167826.1 | 4 | CH_dzi_85 | 3 | 3 | 0.0000000128896 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 4 | CH_lsa_176 | 3 | 4 | 0.0000000634075 |
| Marchantia polymorpha | scaffold_203 | 4 | CH_mpo_36 | 4 | 7 | 0.0000000296804 |
| Punica granatum | NC_045130.1 | 4 | CH_pgr_368 | 2 | 3 | 0.000675279 |
| Pisum sativum | chr5LG3 | 4 | CH_psa_275 | 2 | 2 | 0.00015649 |
| Phaseolus vulgaris | Chr03 | 4 | CH_pvu_175 | 3 | 11 | 0.0000053417 |
| Quercus lobata | 9 | 4 | CH_qlo_49 | 8 | 14 | 8.32657e-24 |
| Salix brachista | GWHAAZH00000002 | 4 | CH_sbr_356 | 2 | 2 | 0.00063014 |
| Salix brachista | GWHAAZH00000005 | 4 | CH_sbr_357 | 2 | 2 | 0.00063014 |
| Selaginella moellendorffii | scaffold_7 | 4 | CH_smo_124 | 3 | 15 | 0.000118791 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 4 | CH_tpr_277 | 2 | 2 | 0.000227092 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_388 | 2 | 2 | 0.000929238 |
| Vitis vinifera | chr18 | 4 | CH_vvi_134 | 3 | 3 | 0.0000000347148 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |