Functional clusters

Information

  • Type Gene Ontology
  • Description nickel cation transport

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 3 CH_arhy_581 2 2 0.000299383
Ceratophyllum demersum 1 3 CH_cde_201 2 2 0.000789796
Ceratophyllum demersum 3 3 CH_cde_202 2 2 0.000789796
Durio zibethinus NW_019168270.1 3 CH_dzi_298 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:8 3 CH_eca_319 2 2 0.000134617
Helianthus annuus HanXRQChr15 3 CH_han_310 3 5 0.000000783861
Lactuca sativa Lsat_1_v8_lg_3 3 CH_lsa_374 2 2 0.000154202
Olea europaea chr21 3 CH_oeu_214 2 2 0.000160137
Phaseolus vulgaris Chr02 3 CH_pvu_320 2 2 0.000440836
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_698 2 2 0.000398653
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 4 CH_arhy_581 2 2 0.000299383
Ceratophyllum demersum 1 4 CH_cde_201 2 2 0.000789796
Ceratophyllum demersum 3 4 CH_cde_202 2 2 0.000789796
Durio zibethinus NW_019168270.1 4 CH_dzi_298 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:8 4 CH_eca_319 2 2 0.000134617
Helianthus annuus HanXRQChr15 4 CH_han_310 3 5 0.000000783861
Lactuca sativa Lsat_1_v8_lg_3 4 CH_lsa_374 2 2 0.000154202
Olea europaea chr21 4 CH_oeu_214 2 2 0.000160137
Phaseolus vulgaris Chr02 4 CH_pvu_320 2 2 0.000440836
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_698 2 2 0.000398653

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001