Functional clusters
Information
- Type Gene Ontology
- Description monolayer-surrounded lipid storage body
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-3 | 3 | CH_aar_134 | 3 | 4 | 0.0000339431 |
| Arabidopsis thaliana | Chr5 | 3 | CH_ath_20 | 8 | 13 | 2.05223e-21 |
| Brassica carinata | ChrB01 | 3 | CH_bca_167 | 4 | 4 | 0.0000000152929 |
| Brassica carinata | ChrC06 | 3 | CH_bca_38 | 9 | 68 | 0.0000000000000512627 |
| Brassica carinata | ChrC04 | 3 | CH_bca_481 | 3 | 3 | 0.0000246688 |
| Brassica napus | C02 | 3 | CH_bna_213 | 4 | 6 | 0.000000312912 |
| Brassica napus | C03 | 3 | CH_bna_474 | 3 | 4 | 0.00012851 |
| Brassica napus | A03 | 3 | CH_bna_73 | 5 | 5 | 0.0000000000133731 |
| Brassica napus | C09 | 3 | CH_bna_74 | 5 | 5 | 0.0000000000133731 |
| Brassica napus | A10 | 3 | CH_bna_97 | 5 | 7 | 0.000000000280535 |
| Brassica oleracea | C2 | 3 | CH_bol_118 | 4 | 6 | 0.000000129138 |
| Brassica oleracea | C3 | 3 | CH_bol_260 | 3 | 4 | 0.0000585579 |
| Brassica oleracea | C9 | 3 | CH_bol_45 | 5 | 5 | 0.00000000000492945 |
| Brassica rapa | A03 | 3 | CH_bra_180 | 3 | 4 | 0.0000858783 |
| Brassica rapa | A10 | 3 | CH_bra_37 | 5 | 5 | 0.0000000000111071 |
| Brassica rapa | A02 | 3 | CH_bra_65 | 4 | 4 | 0.0000000156788 |
| Cardamine hirsuta | Chr6 | 3 | CH_chi_49 | 5 | 5 | 0.00000000000265473 |
| Capsella rubella | scaffold_6 | 3 | CH_cru_18 | 7 | 9 | 5.0342e-17 |
| Eutrema salsugineum | scaffold_2 | 3 | CH_esa_10 | 7 | 7 | 1.78656e-18 |
| Fragaria x ananassa | Fvb2-3 | 3 | CH_fan_261 | 3 | 4 | 0.00000672873 |
| Fragaria vesca | Fvb2 | 3 | CH_fve_159 | 3 | 3 | 0.000000858951 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_311 | 3 | 3 | 0.000000393344 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_350 | 5 | 8 | 0.0000000000274835 |
| Schrenkiella parvula | ch6-6 | 3 | CH_spa_4 | 6 | 6 | 0.00000000000000184776 |
| Aethionema arabicum | LG-3 | 4 | CH_aar_134 | 3 | 4 | 0.0000339431 |
| Arabidopsis thaliana | Chr5 | 4 | CH_ath_20 | 8 | 13 | 2.05223e-21 |
| Brassica carinata | ChrB01 | 4 | CH_bca_167 | 4 | 4 | 0.0000000152929 |
| Brassica carinata | ChrC06 | 4 | CH_bca_38 | 9 | 68 | 0.0000000000000512627 |
| Brassica carinata | ChrC04 | 4 | CH_bca_481 | 3 | 3 | 0.0000246688 |
| Brassica napus | C02 | 4 | CH_bna_213 | 4 | 6 | 0.000000312912 |
| Brassica napus | C03 | 4 | CH_bna_474 | 3 | 4 | 0.00012851 |
| Brassica napus | A03 | 4 | CH_bna_73 | 5 | 5 | 0.0000000000133731 |
| Brassica napus | C09 | 4 | CH_bna_74 | 5 | 5 | 0.0000000000133731 |
| Brassica napus | A10 | 4 | CH_bna_97 | 5 | 7 | 0.000000000280535 |
| Brassica oleracea | C2 | 4 | CH_bol_118 | 4 | 6 | 0.000000129138 |
| Brassica oleracea | C3 | 4 | CH_bol_260 | 3 | 4 | 0.0000585579 |
| Brassica oleracea | C9 | 4 | CH_bol_45 | 5 | 5 | 0.00000000000492945 |
| Brassica rapa | A03 | 4 | CH_bra_180 | 3 | 4 | 0.0000858783 |
| Brassica rapa | A10 | 4 | CH_bra_37 | 5 | 5 | 0.0000000000111071 |
| Brassica rapa | A02 | 4 | CH_bra_65 | 4 | 4 | 0.0000000156788 |
| Cardamine hirsuta | Chr6 | 4 | CH_chi_49 | 5 | 5 | 0.00000000000265473 |
| Capsella rubella | scaffold_6 | 4 | CH_cru_18 | 7 | 9 | 5.0342e-17 |
| Eutrema salsugineum | scaffold_2 | 4 | CH_esa_10 | 7 | 7 | 1.78656e-18 |
| Fragaria x ananassa | Fvb2-3 | 4 | CH_fan_261 | 3 | 4 | 0.00000672873 |
| Fragaria vesca | Fvb2 | 4 | CH_fve_159 | 3 | 3 | 0.000000858951 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_311 | 3 | 3 | 0.000000393344 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_350 | 5 | 8 | 0.0000000000274835 |
| Schrenkiella parvula | ch6-6 | 4 | CH_spa_4 | 6 | 6 | 0.00000000000000184776 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |