Functional clusters
Information
- Type Gene Ontology
- Description chromocenter
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr3 | 3 | CH_acertr_133 | 4 | 7 | 0.0000000874582 |
| Cicer arietinum L. | Ca_LG2_v3 | 3 | CH_car_57 | 4 | 13 | 0.00000239752 |
| Carica papaya | supercontig_84 | 3 | CH_cpa_98 | 3 | 4 | 0.00000455395 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2702 | 3 | CH_cqu_323 | 3 | 4 | 0.0000393841 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2127 | 3 | CH_cqu_356 | 3 | 5 | 0.000098416 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_225 | 3 | 4 | 0.0000185989 |
| Gossypium hirsutum | A10 | 3 | CH_ghi_391 | 3 | 3 | 0.0000296458 |
| Gossypium hirsutum | D10 | 3 | CH_ghi_392 | 3 | 3 | 0.0000296458 |
| Pisum sativum | chr7LG7 | 3 | CH_psa_173 | 3 | 3 | 0.0000149143 |
| Pisum sativum | chr3LG5 | 3 | CH_psa_51 | 5 | 7 | 0.000000000138354 |
| Quercus lobata | 5 | 3 | CH_qlo_553 | 3 | 3 | 0.00000271892 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_375 | 4 | 17 | 0.0000026973 |
| Acer truncatum | chr3 | 4 | CH_acertr_133 | 4 | 7 | 0.0000000874582 |
| Cicer arietinum L. | Ca_LG2_v3 | 4 | CH_car_57 | 4 | 13 | 0.00000239752 |
| Carica papaya | supercontig_84 | 4 | CH_cpa_98 | 3 | 4 | 0.00000455395 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2702 | 4 | CH_cqu_323 | 3 | 4 | 0.0000393841 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2127 | 4 | CH_cqu_356 | 3 | 5 | 0.000098416 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_225 | 3 | 4 | 0.0000185989 |
| Gossypium hirsutum | A10 | 4 | CH_ghi_391 | 3 | 3 | 0.0000296458 |
| Gossypium hirsutum | D10 | 4 | CH_ghi_392 | 3 | 3 | 0.0000296458 |
| Pisum sativum | chr7LG7 | 4 | CH_psa_173 | 3 | 3 | 0.0000149143 |
| Pisum sativum | chr3LG5 | 4 | CH_psa_51 | 5 | 7 | 0.000000000138354 |
| Quercus lobata | 5 | 4 | CH_qlo_553 | 3 | 3 | 0.00000271892 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_375 | 4 | 17 | 0.0000026973 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0010370 | perinucleolar chromocenter | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |