Functional clusters
Information
- Type Gene Ontology
- Description chlorophyllide a oxygenase [overall] activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR02 | 3 | CH_aox_93 | 3 | 4 | 0.000000771754 |
| Cannabis sativa | NC_044377.1 | 3 | CH_cansat_40 | 5 | 8 | 0.000000000000163966 |
| Citrullus lanatus | CG_Chr03 | 3 | CH_cla_171 | 2 | 2 | 0.000887115 |
| Carica papaya | supercontig_119 | 3 | CH_cpa_299 | 2 | 2 | 0.000950661 |
| Cucumis sativus L. | chr1 | 3 | CH_csa_64 | 4 | 5 | 0.000000000610733 |
| Fragaria vesca | Fvb7 | 3 | CH_fve_142 | 3 | 3 | 0.000000291523 |
| Gossypium hirsutum | D08 | 3 | CH_ghi_124 | 4 | 4 | 0.0000000000571719 |
| Gossypium raimondii | Chr04 | 3 | CH_gra_125 | 3 | 3 | 0.000000150895 |
| Helianthus annuus | HanXRQChr14 | 3 | CH_han_301 | 5 | 65 | 0.000000596382 |
| Malus domestica | Chr11 | 3 | CH_mdo_704 | 2 | 2 | 0.000796344 |
| Medicago truncatula | chr8 | 3 | CH_mtr_353 | 3 | 6 | 0.00000101267 |
| Oryza sativa ssp. japonica | chr03 | 3 | CH_osa_41 | 5 | 9 | 0.000000000000926 |
| Prunus persica | Pp01 | 3 | CH_ppe_467 | 2 | 2 | 0.000745962 |
| Populus trichocarpa | Chr03 | 3 | CH_ptr_143 | 4 | 6 | 0.00000000429988 |
| Quercus lobata | 1 | 3 | CH_qlo_293 | 4 | 8 | 0.00000000101122 |
| Rhododendron simsii | chr02 | 3 | CH_rsi_502 | 2 | 2 | 0.000645307 |
| Salvia bowleyana | GWHASIU00000007 | 3 | CH_sbo_183 | 3 | 3 | 0.000000108681 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_1206 | 2 | 2 | 0.000292291 |
| Tripterygium wilfordii | NC_052246.1 | 3 | CH_twi_120 | 3 | 3 | 0.000000392161 |
| Vitis vinifera | chr6 | 3 | CH_vvi_206 | 3 | 7 | 0.00000607208 |
| Aquilegia oxysepala | CHR02 | 4 | CH_aox_93 | 3 | 4 | 0.000000771754 |
| Cannabis sativa | NC_044377.1 | 4 | CH_cansat_40 | 5 | 8 | 0.000000000000163966 |
| Citrullus lanatus | CG_Chr03 | 4 | CH_cla_171 | 2 | 2 | 0.000887115 |
| Carica papaya | supercontig_119 | 4 | CH_cpa_299 | 2 | 2 | 0.000950661 |
| Cucumis sativus L. | chr1 | 4 | CH_csa_64 | 4 | 5 | 0.000000000610733 |
| Fragaria vesca | Fvb7 | 4 | CH_fve_142 | 3 | 3 | 0.000000291523 |
| Gossypium hirsutum | D08 | 4 | CH_ghi_124 | 4 | 4 | 0.0000000000571719 |
| Gossypium raimondii | Chr04 | 4 | CH_gra_125 | 3 | 3 | 0.000000150895 |
| Helianthus annuus | HanXRQChr14 | 4 | CH_han_301 | 5 | 65 | 0.000000596382 |
| Malus domestica | Chr11 | 4 | CH_mdo_704 | 2 | 2 | 0.000796344 |
| Medicago truncatula | chr8 | 4 | CH_mtr_353 | 3 | 6 | 0.00000101267 |
| Oryza sativa ssp. japonica | chr03 | 4 | CH_osa_41 | 5 | 9 | 0.000000000000926 |
| Prunus persica | Pp01 | 4 | CH_ppe_467 | 2 | 2 | 0.000745962 |
| Populus trichocarpa | Chr03 | 4 | CH_ptr_143 | 4 | 6 | 0.00000000429988 |
| Quercus lobata | 1 | 4 | CH_qlo_293 | 4 | 8 | 0.00000000101122 |
| Rhododendron simsii | chr02 | 4 | CH_rsi_502 | 2 | 2 | 0.000645307 |
| Salvia bowleyana | GWHASIU00000007 | 4 | CH_sbo_183 | 3 | 3 | 0.000000108681 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_1206 | 2 | 2 | 0.000292291 |
| Tripterygium wilfordii | NC_052246.1 | 4 | CH_twi_120 | 3 | 3 | 0.000000392161 |
| Vitis vinifera | chr6 | 4 | CH_vvi_206 | 3 | 7 | 0.00000607208 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |