Functional clusters
Information
- Type Gene Ontology
- Description response to vitamin B1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-2 | 3 | CH_aar_215 | 2 | 2 | 0.000273698 |
| Carpinus fangiana | Cfa02 | 3 | CH_cfa_310 | 2 | 2 | 0.000454408 |
| Carya illinoinensis | Chr05 | 3 | CH_cil_121 | 4 | 5 | 0.0000000000178604 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2587 | 3 | CH_cqu_239 | 3 | 6 | 0.00000377053 |
| Chlamydomonas reinhardtii | chromosome_6 | 3 | CH_cre_42 | 3 | 9 | 0.0000325626 |
| Davidia involucrata | GWHABJS00000005 | 3 | CH_din_120 | 3 | 4 | 0.000000150069 |
| Eucalyptus grandis | Chr07 | 3 | CH_egr_89 | 9 | 32 | 3.90509e-21 |
| Glycine max | Gm15 | 3 | CH_gma_134 | 3 | 3 | 0.0000000216099 |
| Lupinus albus | Lalb_Chr18 | 3 | CH_lal_296 | 2 | 2 | 0.000157447 |
| Magnolia biondii | Chr16 | 3 | CH_mbi_196 | 4 | 29 | 0.000000122247 |
| Manihot esculenta | Chromosome07 | 3 | CH_mes_365 | 2 | 2 | 0.000366379 |
| Medicago truncatula | chr3 | 3 | CH_mtr_662 | 2 | 3 | 0.000369764 |
| Prunus persica | Pp08 | 3 | CH_ppe_234 | 3 | 8 | 0.00000186917 |
| Papaver somniferum | NW_020632152.1 | 3 | CH_pso_615 | 2 | 3 | 0.000405518 |
| Populus trichocarpa | Chr09 | 3 | CH_ptr_97 | 4 | 4 | 0.00000000000869034 |
| Sechium edule | LG10 | 3 | CH_sed_261 | 2 | 3 | 0.000642039 |
| Selaginella moellendorffii | scaffold_24 | 3 | CH_smo_93 | 3 | 6 | 0.0000313591 |
| Tarenaya hassleriana | NW_010963495.1 | 3 | CH_tha_40 | 3 | 3 | 0.0000000292727 |
| Vitis vinifera | chr3 | 3 | CH_vvi_402 | 2 | 3 | 0.000684523 |
| Zea mays | 7 | 3 | CH_zma_354 | 2 | 4 | 0.000920285 |
| Aethionema arabicum | LG-2 | 4 | CH_aar_215 | 2 | 2 | 0.000273698 |
| Carpinus fangiana | Cfa02 | 4 | CH_cfa_310 | 2 | 2 | 0.000454408 |
| Carya illinoinensis | Chr05 | 4 | CH_cil_121 | 4 | 5 | 0.0000000000178604 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2587 | 4 | CH_cqu_239 | 3 | 6 | 0.00000377053 |
| Chlamydomonas reinhardtii | chromosome_6 | 4 | CH_cre_42 | 3 | 9 | 0.0000325626 |
| Davidia involucrata | GWHABJS00000005 | 4 | CH_din_120 | 3 | 4 | 0.000000150069 |
| Eucalyptus grandis | Chr07 | 4 | CH_egr_89 | 9 | 32 | 3.90509e-21 |
| Glycine max | Gm15 | 4 | CH_gma_134 | 3 | 3 | 0.0000000216099 |
| Lupinus albus | Lalb_Chr18 | 4 | CH_lal_296 | 2 | 2 | 0.000157447 |
| Magnolia biondii | Chr16 | 4 | CH_mbi_196 | 4 | 29 | 0.000000122247 |
| Manihot esculenta | Chromosome07 | 4 | CH_mes_365 | 2 | 2 | 0.000366379 |
| Medicago truncatula | chr3 | 4 | CH_mtr_662 | 2 | 3 | 0.000369764 |
| Prunus persica | Pp08 | 4 | CH_ppe_234 | 3 | 8 | 0.00000186917 |
| Papaver somniferum | NW_020632152.1 | 4 | CH_pso_615 | 2 | 3 | 0.000405518 |
| Populus trichocarpa | Chr09 | 4 | CH_ptr_97 | 4 | 4 | 0.00000000000869034 |
| Sechium edule | LG10 | 4 | CH_sed_261 | 2 | 3 | 0.000642039 |
| Selaginella moellendorffii | scaffold_24 | 4 | CH_smo_93 | 3 | 6 | 0.0000313591 |
| Tarenaya hassleriana | NW_010963495.1 | 4 | CH_tha_40 | 3 | 3 | 0.0000000292727 |
| Vitis vinifera | chr3 | 4 | CH_vvi_402 | 2 | 3 | 0.000684523 |
| Zea mays | 7 | 4 | CH_zma_354 | 2 | 4 | 0.000920285 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |