Functional clusters
Information
- Type Gene Ontology
- Description pollen tube guidance
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.04 | 3 | CH_arhy_155 | 7 | 19 | 0.0000000000127862 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 3 | CH_arhy_82 | 9 | 20 | 5.5955e-17 |
| Camellia sinensis var. sinensis | Chr4 | 3 | CH_camsi_446 | 4 | 11 | 0.0000154912 |
| Cannabis sativa | NC_044379.1 | 3 | CH_cansat_72 | 5 | 6 | 0.000000000550064 |
| Corylus avellana | 3 | 3 | CH_cav_188 | 4 | 10 | 0.0000115551 |
| Citrus clementina | scaffold_8 | 3 | CH_ccl_170 | 5 | 10 | 0.000000116495 |
| Citrus clementina | scaffold_3 | 3 | CH_ccl_61 | 8 | 17 | 0.0000000000000493476 |
| Davidia involucrata | GWHABJS00000011 | 3 | CH_din_215 | 3 | 3 | 0.0000267891 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_307 | 5 | 6 | 0.000000000264861 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_835 | 3 | 5 | 0.00043278 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 3 | CH_lsa_66 | 9 | 43 | 0.00000000000102402 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 3 | CH_lsa_8 | 14 | 28 | 3.51791e-28 |
| Manihot esculenta | Chromosome02 | 3 | CH_mes_174 | 4 | 5 | 0.000000251906 |
| Papaver somniferum | NW_020622270.1 | 3 | CH_pso_176 | 6 | 19 | 0.00000000233669 |
| Populus trichocarpa | Chr19 | 3 | CH_ptr_221 | 7 | 62 | 0.00000058373 |
| Populus trichocarpa | Chr19 | 3 | CH_ptr_52 | 8 | 12 | 9.84744e-16 |
| Quercus lobata | 9 | 3 | CH_qlo_197 | 8 | 30 | 0.00000000000132677 |
| Trochodendron aralioides | group14 | 3 | CH_tar_73 | 5 | 6 | 0.00000000203153 |
| Tripterygium wilfordii | NC_052243.1 | 3 | CH_twi_107 | 4 | 4 | 0.000000152542 |
| Tripterygium wilfordii | NC_052242.1 | 3 | CH_twi_73 | 5 | 7 | 0.00000000436875 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.04 | 4 | CH_arhy_155 | 7 | 19 | 0.0000000000127862 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 4 | CH_arhy_82 | 9 | 20 | 5.5955e-17 |
| Camellia sinensis var. sinensis | Chr4 | 4 | CH_camsi_446 | 4 | 11 | 0.0000154912 |
| Cannabis sativa | NC_044379.1 | 4 | CH_cansat_72 | 5 | 6 | 0.000000000550064 |
| Corylus avellana | 3 | 4 | CH_cav_188 | 4 | 10 | 0.0000115551 |
| Citrus clementina | scaffold_8 | 4 | CH_ccl_170 | 5 | 10 | 0.000000116495 |
| Citrus clementina | scaffold_3 | 4 | CH_ccl_61 | 8 | 17 | 0.0000000000000493476 |
| Davidia involucrata | GWHABJS00000011 | 4 | CH_din_215 | 3 | 3 | 0.0000267891 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_307 | 5 | 6 | 0.000000000264861 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_835 | 3 | 5 | 0.00043278 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 4 | CH_lsa_66 | 9 | 43 | 0.00000000000102402 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 4 | CH_lsa_8 | 14 | 28 | 3.51791e-28 |
| Manihot esculenta | Chromosome02 | 4 | CH_mes_174 | 4 | 5 | 0.000000251906 |
| Papaver somniferum | NW_020622270.1 | 4 | CH_pso_176 | 6 | 19 | 0.00000000233669 |
| Populus trichocarpa | Chr19 | 4 | CH_ptr_221 | 7 | 62 | 0.00000058373 |
| Populus trichocarpa | Chr19 | 4 | CH_ptr_52 | 8 | 12 | 9.84744e-16 |
| Quercus lobata | 9 | 4 | CH_qlo_197 | 8 | 30 | 0.00000000000132677 |
| Trochodendron aralioides | group14 | 4 | CH_tar_73 | 5 | 6 | 0.00000000203153 |
| Tripterygium wilfordii | NC_052243.1 | 4 | CH_twi_107 | 4 | 4 | 0.000000152542 |
| Tripterygium wilfordii | NC_052242.1 | 4 | CH_twi_73 | 5 | 7 | 0.00000000436875 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |