Functional clusters
Information
- Type Gene Ontology
- Description regulation of seed germination
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 3 | CH_arhy_339 | 4 | 5 | 0.00000122616 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_189 | 11 | 54 | 0.0000000000000166464 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 4 | CH_arhy_339 | 4 | 5 | 0.00000122616 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_189 | 11 | 54 | 0.0000000000000166464 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0010030 | positive regulation of seed germination | 2 |
| GO:0010187 | negative regulation of seed germination | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |