Functional clusters
Information
- Type Gene Ontology
- Description cyclase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | ChrC06 | 3 | CH_bca_783 | 3 | 10 | 0.000369115 |
Brassica napus | A06 | 3 | CH_bna_444 | 3 | 6 | 0.0000737472 |
Brassica rapa | A06 | 3 | CH_bra_249 | 3 | 9 | 0.000356941 |
Schrenkiella parvula | ch2-4 | 3 | CH_spa_180 | 3 | 8 | 0.0004239 |
Brassica carinata | ChrC06 | 4 | CH_bca_783 | 3 | 10 | 0.000369115 |
Brassica napus | A06 | 4 | CH_bna_444 | 3 | 6 | 0.0000737472 |
Brassica rapa | A06 | 4 | CH_bra_249 | 3 | 9 | 0.000356941 |
Schrenkiella parvula | ch2-4 | 4 | CH_spa_180 | 3 | 8 | 0.0004239 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0004016 | adenylate cyclase activity | 18 |
GO:0004383 | guanylate cyclase activity | 12 |
GO:0009976 | tocopherol cyclase activity | 8 |
GO:0045435 | lycopene epsilon cyclase activity | 2 |
GO:0045436 | lycopene beta cyclase activity | 6 |
GO:0046423 | allene-oxide cyclase activity | 26 |
GO:0080016 | (-)-E-beta-caryophyllene synthase activity | 14 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |