Functional clusters

Information

  • Type Gene Ontology
  • Description jasmonic acid and ethylene-dependent systemic resistance

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 3 CH_arhy_544 3 4 0.000183911
Brassica carinata ChrC08 3 CH_bca_245 4 6 0.000000186322
Brassica carinata ChrB05 3 CH_bca_306 4 8 0.000000868681
Brassica napus A07 3 CH_bna_172 4 5 0.0000000467588
Brassica napus A02 3 CH_bna_367 3 3 0.0000176852
Brassica napus C02 3 CH_bna_368 3 3 0.0000176852
Brassica napus C06 3 CH_bna_554 3 6 0.000353272
Brassica oleracea C2 3 CH_bol_212 3 3 0.000010489
Brassica rapa A02 3 CH_bra_148 3 3 0.0000150843
Brassica rapa A07 3 CH_bra_176 3 4 0.0000603066
Citrus clementina scaffold_8 3 CH_ccl_143 4 4 0.0000000290661
Capsella rubella scaffold_2 3 CH_cru_17 7 7 2.45064e-17
Erigeron canadensis Conyza_canadensis_scaffold:3 3 CH_eca_15 7 12 7.93126e-16
Eutrema salsugineum scaffold_9 3 CH_esa_62 4 4 0.000000027127
Lactuca sativa Lsat_1_v8_lg_7 3 CH_lsa_52 7 10 0.00000000000000666386
Medicago truncatula chr8 3 CH_mtr_27 10 19 2.43757e-22
Nicotiana tabacum Nitab4.5_0000023 3 CH_nta_63 3 3 0.0000147379
Petunia axillaris Peaxi162Scf00324 3 CH_pax_69 4 5 0.0000000660469
Physcomitrium patens Chr16 3 CH_ppa_227 4 24 0.000805226
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 4 CH_arhy_544 3 4 0.000183911
Brassica carinata ChrC08 4 CH_bca_245 4 6 0.000000186322
Brassica carinata ChrB05 4 CH_bca_306 4 8 0.000000868681
Brassica napus A07 4 CH_bna_172 4 5 0.0000000467588
Brassica napus A02 4 CH_bna_367 3 3 0.0000176852
Brassica napus C02 4 CH_bna_368 3 3 0.0000176852
Brassica napus C06 4 CH_bna_554 3 6 0.000353272
Brassica oleracea C2 4 CH_bol_212 3 3 0.000010489
Brassica rapa A02 4 CH_bra_148 3 3 0.0000150843
Brassica rapa A07 4 CH_bra_176 3 4 0.0000603066
Citrus clementina scaffold_8 4 CH_ccl_143 4 4 0.0000000290661
Capsella rubella scaffold_2 4 CH_cru_17 7 7 2.45064e-17
Erigeron canadensis Conyza_canadensis_scaffold:3 4 CH_eca_15 7 12 7.93126e-16
Eutrema salsugineum scaffold_9 4 CH_esa_62 4 4 0.000000027127
Lactuca sativa Lsat_1_v8_lg_7 4 CH_lsa_52 7 10 0.00000000000000666386
Medicago truncatula chr8 4 CH_mtr_27 10 19 2.43757e-22
Nicotiana tabacum Nitab4.5_0000023 4 CH_nta_63 3 3 0.0000147379
Petunia axillaris Peaxi162Scf00324 4 CH_pax_69 4 5 0.0000000660469
Physcomitrium patens Chr16 4 CH_ppa_227 4 24 0.000805226

Available child term results

Ontology identifier Description Number of clusters
GO:0009868 jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001