Functional clusters
Information
- Type Gene Ontology
- Description response to gibberellin
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 3 | CH_arhy_188 | 6 | 6 | 0.00000000022952 |
Corylus avellana | 5 | 3 | CH_cav_239 | 4 | 5 | 0.0000674155 |
Eucalyptus grandis | Chr06 | 3 | CH_egr_506 | 5 | 7 | 0.000000793714 |
Helianthus annuus | HanXRQChr16 | 3 | CH_han_129 | 9 | 26 | 0.0000000000434485 |
Pisum sativum | chr5LG3 | 3 | CH_psa_388 | 4 | 10 | 0.000909925 |
Trifolium pratense | Tp57577_TGAC_v2_LG3 | 3 | CH_tpr_115 | 5 | 8 | 0.00000145208 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 4 | CH_arhy_188 | 6 | 6 | 0.00000000022952 |
Corylus avellana | 5 | 4 | CH_cav_239 | 4 | 5 | 0.0000674155 |
Eucalyptus grandis | Chr06 | 4 | CH_egr_506 | 5 | 7 | 0.000000793714 |
Helianthus annuus | HanXRQChr16 | 4 | CH_han_129 | 9 | 26 | 0.0000000000434485 |
Pisum sativum | chr5LG3 | 4 | CH_psa_388 | 4 | 10 | 0.000909925 |
Trifolium pratense | Tp57577_TGAC_v2_LG3 | 4 | CH_tpr_115 | 5 | 8 | 0.00000145208 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0009740 | gibberellic acid mediated signaling pathway | 6 |
GO:0009937 | regulation of gibberellic acid mediated signaling pathway | 8 |
GO:0009939 | positive regulation of gibberellic acid mediated signaling pathway | 2 |
GO:0071370 | cellular response to gibberellin stimulus | 6 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |