Functional clusters

Information

  • Type Gene Ontology
  • Description response to abscisic acid

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 3 CH_aag_121 9 21 0.00011738
Carya illinoinensis Chr01 3 CH_cil_433 13 78 0.000227947
Populus trichocarpa Chr14 3 CH_ptr_445 11 60 0.00081732
Rhododendron simsii chr01 3 CH_rsi_385 5 6 0.000161897
Sequoiadendron giganteum chr4 3 CH_sgi_1024 5 5 0.0000657847
Anthoceros agrestis Sc2ySwM_228 4 CH_aag_121 9 21 0.00011738
Carya illinoinensis Chr01 4 CH_cil_433 13 78 0.000227947
Populus trichocarpa Chr14 4 CH_ptr_445 11 60 0.00081732
Rhododendron simsii chr01 4 CH_rsi_385 5 6 0.000161897
Sequoiadendron giganteum chr4 4 CH_sgi_1024 5 5 0.0000657847

Available child term results

Ontology identifier Description Number of clusters
GO:0009738 abscisic acid-activated signaling pathway 10
GO:0009787 regulation of abscisic acid-activated signaling pathway 12
GO:0009788 negative regulation of abscisic acid-activated signaling pathway 6
GO:0009789 positive regulation of abscisic acid-activated signaling pathway 2
GO:0071215 cellular response to abscisic acid stimulus 6
GO:0098755 maintenance of seed dormancy by absisic acid 6
GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement 16

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001