Functional clusters
Information
- Type Gene Ontology
- Description induced systemic resistance
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsella rubella | scaffold_6 | 3 | CH_cru_181 | 3 | 3 | 0.0000106654 |
| Daucus carota | DCARv2_Chr2 | 3 | CH_dca_25 | 6 | 6 | 0.00000000000000319663 |
| Eutrema salsugineum | scaffold_3 | 3 | CH_esa_121 | 3 | 3 | 0.00000842888 |
| Capsella rubella | scaffold_6 | 4 | CH_cru_181 | 3 | 3 | 0.0000106654 |
| Daucus carota | DCARv2_Chr2 | 4 | CH_dca_25 | 6 | 6 | 0.00000000000000319663 |
| Eutrema salsugineum | scaffold_3 | 4 | CH_esa_121 | 3 | 3 | 0.00000842888 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0009864 | induced systemic resistance, jasmonic acid mediated signaling pathway | 8 |
| GO:0009866 | induced systemic resistance, ethylene mediated signaling pathway | 8 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |