Functional clusters
Information
- Type Gene Ontology
- Description response to herbicide
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Corylus avellana | 4 | 3 | CH_cav_49 | 7 | 29 | 0.00000000000604676 |
| Carpinus fangiana | Cfa05 | 3 | CH_cfa_50 | 6 | 14 | 0.00000000002967 |
| Cucumis melo | chr09 | 3 | CH_cme_277 | 3 | 9 | 0.000743657 |
| Cucumis sativus L. | chr5 | 3 | CH_csa_260 | 3 | 8 | 0.000665393 |
| Durio zibethinus | NW_019167838.1 | 3 | CH_dzi_334 | 3 | 7 | 0.000803358 |
| Glycine max | Gm08 | 3 | CH_gma_450 | 3 | 6 | 0.000459951 |
| Lupinus albus | Lalb_Chr05 | 3 | CH_lal_316 | 3 | 5 | 0.000246927 |
| Lotus japonicus | chr4 | 3 | CH_lja_297 | 3 | 6 | 0.000309937 |
| Medicago truncatula | chr8 | 3 | CH_mtr_639 | 3 | 7 | 0.000258828 |
| Punica granatum | NC_045127.1 | 3 | CH_pgr_360 | 3 | 7 | 0.000596801 |
| Prunus persica | Pp05 | 3 | CH_ppe_114 | 6 | 14 | 0.0000000000584725 |
| Phaseolus vulgaris | Chr02 | 3 | CH_pvu_305 | 3 | 6 | 0.000327188 |
| Rhododendron simsii | chr09 | 3 | CH_rsi_436 | 3 | 6 | 0.000286853 |
| Salix brachista | GWHAAZH00000001 | 3 | CH_sbr_311 | 3 | 7 | 0.000320429 |
| Selenicereus undatus | Scaffold_33677 | 3 | CH_sun_212 | 3 | 8 | 0.000588355 |
| Theobroma cacao | Chromosome_3 | 3 | CH_tca_400 | 3 | 9 | 0.000768173 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 3 | CH_tpr_254 | 3 | 6 | 0.000166334 |
| Vigna mungo | CM024069.1 | 3 | CH_vmu_251 | 3 | 6 | 0.00022148 |
| Vigna mungo | CM024074.1 | 3 | CH_vmu_252 | 3 | 6 | 0.00022148 |
| Vitis vinifera | chr2 | 3 | CH_vvi_390 | 3 | 8 | 0.000552601 |
| Corylus avellana | 4 | 4 | CH_cav_49 | 7 | 29 | 0.00000000000604676 |
| Carpinus fangiana | Cfa05 | 4 | CH_cfa_50 | 6 | 14 | 0.00000000002967 |
| Cucumis melo | chr09 | 4 | CH_cme_277 | 3 | 9 | 0.000743657 |
| Cucumis sativus L. | chr5 | 4 | CH_csa_260 | 3 | 8 | 0.000665393 |
| Durio zibethinus | NW_019167838.1 | 4 | CH_dzi_334 | 3 | 7 | 0.000803358 |
| Glycine max | Gm08 | 4 | CH_gma_450 | 3 | 6 | 0.000459951 |
| Lupinus albus | Lalb_Chr05 | 4 | CH_lal_316 | 3 | 5 | 0.000246927 |
| Lotus japonicus | chr4 | 4 | CH_lja_297 | 3 | 6 | 0.000309937 |
| Medicago truncatula | chr8 | 4 | CH_mtr_639 | 3 | 7 | 0.000258828 |
| Punica granatum | NC_045127.1 | 4 | CH_pgr_360 | 3 | 7 | 0.000596801 |
| Prunus persica | Pp05 | 4 | CH_ppe_114 | 6 | 14 | 0.0000000000584725 |
| Phaseolus vulgaris | Chr02 | 4 | CH_pvu_305 | 3 | 6 | 0.000327188 |
| Rhododendron simsii | chr09 | 4 | CH_rsi_436 | 3 | 6 | 0.000286853 |
| Salix brachista | GWHAAZH00000001 | 4 | CH_sbr_311 | 3 | 7 | 0.000320429 |
| Selenicereus undatus | Scaffold_33677 | 4 | CH_sun_212 | 3 | 8 | 0.000588355 |
| Theobroma cacao | Chromosome_3 | 4 | CH_tca_400 | 3 | 9 | 0.000768173 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 4 | CH_tpr_254 | 3 | 6 | 0.000166334 |
| Vigna mungo | CM024069.1 | 4 | CH_vmu_251 | 3 | 6 | 0.00022148 |
| Vigna mungo | CM024074.1 | 4 | CH_vmu_252 | 3 | 6 | 0.00022148 |
| Vitis vinifera | chr2 | 4 | CH_vvi_390 | 3 | 8 | 0.000552601 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |