Functional clusters
Information
- Type Gene Ontology
- Description response to UV
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Daucus carota | DCARv2_Chr3 | 3 | CH_dca_29 | 8 | 8 | 0.0000000000000147639 |
| Manihot esculenta | Chromosome08 | 3 | CH_mes_374 | 4 | 7 | 0.000417999 |
| Theobroma cacao | Chromosome_5 | 3 | CH_tca_147 | 6 | 12 | 0.000000156638 |
| Tripterygium wilfordii | NC_052250.1 | 3 | CH_twi_97 | 6 | 10 | 0.0000000597056 |
| Daucus carota | DCARv2_Chr3 | 4 | CH_dca_29 | 8 | 8 | 0.0000000000000147639 |
| Manihot esculenta | Chromosome08 | 4 | CH_mes_374 | 4 | 7 | 0.000417999 |
| Theobroma cacao | Chromosome_5 | 4 | CH_tca_147 | 6 | 12 | 0.000000156638 |
| Tripterygium wilfordii | NC_052250.1 | 4 | CH_twi_97 | 6 | 10 | 0.0000000597056 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0010224 | response to UV-B | 6 |
| GO:0010225 | response to UV-C | 6 |
| GO:0010767 | regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage | 4 |
| GO:0034644 | cellular response to UV | 2 |
| GO:0071492 | cellular response to UV-A | 2 |
| GO:0071493 | cellular response to UV-B | 12 |
| GO:0071494 | cellular response to UV-C | 6 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |