Functional clusters
Information
- Type Gene Ontology
- Description phospholipase A1 activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 3 | CH_bvu_127 | 3 | 3 | 0.0000037427 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 3 | CH_bvu_144 | 3 | 4 | 0.0000149651 |
| Camellia sinensis var. sinensis | Chr8 | 3 | CH_camsi_487 | 3 | 5 | 0.0000419211 |
| Capsicum annuum | PGAv.1.6.scaffold702 | 3 | CH_can_10 | 13 | 26 | 1.65422e-29 |
| Corylus avellana | 2 | 3 | CH_cav_178 | 3 | 3 | 0.0000071952 |
| Corylus avellana | 5 | 3 | CH_cav_83 | 4 | 4 | 0.00000000413771 |
| Chara braunii | BFEA01000322 | 3 | CH_cbr_141 | 2 | 2 | 0.000215781 |
| Carpinus fangiana | Cfa01 | 3 | CH_cfa_79 | 4 | 4 | 0.00000000237206 |
| Cardamine hirsuta | Chr1 | 3 | CH_chi_169 | 3 | 3 | 0.00000584803 |
| Corchorus olitorius | AWUE01020841.1 | 3 | CH_col_5 | 7 | 8 | 3.13647e-18 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1829 | 3 | CH_cqu_251 | 4 | 11 | 0.00000617655 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1606 | 3 | CH_cqu_355 | 3 | 4 | 0.0000961223 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4266 | 3 | CH_cqu_408 | 3 | 5 | 0.000240159 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3389 | 3 | CH_cqu_409 | 3 | 5 | 0.000240159 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3826 | 3 | CH_cqu_410 | 3 | 5 | 0.000240159 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2306 | 3 | CH_cqu_88 | 5 | 7 | 0.000000000298938 |
| Davidia involucrata | GWHABJS00000013 | 3 | CH_din_102 | 5 | 24 | 0.0000000666101 |
| Durio zibethinus | NW_019167982.1 | 3 | CH_dzi_146 | 3 | 3 | 0.00000262948 |
| Eucalyptus grandis | Chr05 | 3 | CH_egr_249 | 6 | 18 | 0.00000000000530553 |
| Fragaria x ananassa | Fvb3-1 | 3 | CH_fan_541 | 3 | 8 | 0.000753137 |
| Hydrangea macrophylla | Hma1.2p1_0155F.1 | 3 | CH_hma_77 | 3 | 3 | 0.000000647896 |
| Lupinus albus | Lalb_Chr12 | 3 | CH_lal_181 | 3 | 3 | 0.00000471015 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 3 | CH_lsa_98 | 5 | 10 | 0.0000000000815343 |
| Malus domestica | Chr05 | 3 | CH_mdo_454 | 3 | 6 | 0.0000991261 |
| Manihot esculenta | Chromosome16 | 3 | CH_mes_83 | 5 | 5 | 0.00000000000161696 |
| Nelumbo nucifera | chr1 | 3 | CH_nnu_136 | 3 | 3 | 0.00000283999 |
| Nicotiana tabacum | Nitab4.5_0000681 | 3 | CH_nta_62 | 3 | 4 | 0.0000119158 |
| Petunia axillaris | Peaxi162Scf00223 | 3 | CH_pax_42 | 5 | 8 | 0.000000000159353 |
| Prunus persica | Pp05 | 3 | CH_ppe_242 | 3 | 3 | 0.00000303839 |
| Papaver somniferum | NC_039365.1 | 3 | CH_pso_258 | 5 | 47 | 0.00000019328 |
| Rhododendron simsii | chr13 | 3 | CH_rsi_20 | 9 | 11 | 1.14017e-24 |
| Salvia bowleyana | GWHASIU00000005 | 3 | CH_sbo_36 | 7 | 8 | 1.77865e-19 |
| Salix brachista | GWHAAZH00000015 | 3 | CH_sbr_73 | 4 | 4 | 0.00000000102472 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_429 | 4 | 5 | 0.000000000858305 |
| Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_13 | 12 | 44 | 3.76215e-25 |
| Solanum pennellii | Spenn-ch02 | 3 | CH_spe_9 | 11 | 42 | 6.78815e-24 |
| Solanum tuberosum | ST4.03ch02 | 3 | CH_stu_13 | 14 | 52 | 1.25451e-29 |
| Theobroma cacao | Chromosome_6 | 3 | CH_tca_27 | 6 | 6 | 5.86979e-16 |
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 4 | CH_bvu_127 | 3 | 3 | 0.0000037427 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 4 | CH_bvu_144 | 3 | 4 | 0.0000149651 |
| Camellia sinensis var. sinensis | Chr8 | 4 | CH_camsi_487 | 3 | 5 | 0.0000419211 |
| Capsicum annuum | PGAv.1.6.scaffold702 | 4 | CH_can_10 | 13 | 26 | 1.65422e-29 |
| Corylus avellana | 2 | 4 | CH_cav_178 | 3 | 3 | 0.0000071952 |
| Corylus avellana | 5 | 4 | CH_cav_83 | 4 | 4 | 0.00000000413771 |
| Chara braunii | BFEA01000322 | 4 | CH_cbr_141 | 2 | 2 | 0.000215781 |
| Carpinus fangiana | Cfa01 | 4 | CH_cfa_79 | 4 | 4 | 0.00000000237206 |
| Cardamine hirsuta | Chr1 | 4 | CH_chi_169 | 3 | 3 | 0.00000584803 |
| Corchorus olitorius | AWUE01020841.1 | 4 | CH_col_5 | 7 | 8 | 3.13647e-18 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1829 | 4 | CH_cqu_251 | 4 | 11 | 0.00000617655 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1606 | 4 | CH_cqu_355 | 3 | 4 | 0.0000961223 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4266 | 4 | CH_cqu_408 | 3 | 5 | 0.000240159 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3389 | 4 | CH_cqu_409 | 3 | 5 | 0.000240159 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3826 | 4 | CH_cqu_410 | 3 | 5 | 0.000240159 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2306 | 4 | CH_cqu_88 | 5 | 7 | 0.000000000298938 |
| Davidia involucrata | GWHABJS00000013 | 4 | CH_din_102 | 5 | 24 | 0.0000000666101 |
| Durio zibethinus | NW_019167982.1 | 4 | CH_dzi_146 | 3 | 3 | 0.00000262948 |
| Eucalyptus grandis | Chr05 | 4 | CH_egr_249 | 6 | 18 | 0.00000000000530553 |
| Fragaria x ananassa | Fvb3-1 | 4 | CH_fan_541 | 3 | 8 | 0.000753137 |
| Hydrangea macrophylla | Hma1.2p1_0155F.1 | 4 | CH_hma_77 | 3 | 3 | 0.000000647896 |
| Lupinus albus | Lalb_Chr12 | 4 | CH_lal_181 | 3 | 3 | 0.00000471015 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 4 | CH_lsa_98 | 5 | 10 | 0.0000000000815343 |
| Malus domestica | Chr05 | 4 | CH_mdo_454 | 3 | 6 | 0.0000991261 |
| Manihot esculenta | Chromosome16 | 4 | CH_mes_83 | 5 | 5 | 0.00000000000161696 |
| Nelumbo nucifera | chr1 | 4 | CH_nnu_136 | 3 | 3 | 0.00000283999 |
| Nicotiana tabacum | Nitab4.5_0000681 | 4 | CH_nta_62 | 3 | 4 | 0.0000119158 |
| Petunia axillaris | Peaxi162Scf00223 | 4 | CH_pax_42 | 5 | 8 | 0.000000000159353 |
| Prunus persica | Pp05 | 4 | CH_ppe_242 | 3 | 3 | 0.00000303839 |
| Papaver somniferum | NC_039365.1 | 4 | CH_pso_258 | 5 | 47 | 0.00000019328 |
| Rhododendron simsii | chr13 | 4 | CH_rsi_20 | 9 | 11 | 1.14017e-24 |
| Salvia bowleyana | GWHASIU00000005 | 4 | CH_sbo_36 | 7 | 8 | 1.77865e-19 |
| Salix brachista | GWHAAZH00000015 | 4 | CH_sbr_73 | 4 | 4 | 0.00000000102472 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_429 | 4 | 5 | 0.000000000858305 |
| Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_13 | 12 | 44 | 3.76215e-25 |
| Solanum pennellii | Spenn-ch02 | 4 | CH_spe_9 | 11 | 42 | 6.78815e-24 |
| Solanum tuberosum | ST4.03ch02 | 4 | CH_stu_13 | 14 | 52 | 1.25451e-29 |
| Theobroma cacao | Chromosome_6 | 4 | CH_tca_27 | 6 | 6 | 5.86979e-16 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |