Functional clusters

Information

  • Type Gene Ontology
  • Description 1-deoxy-D-xylulose-5-phosphate synthase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00019 3 CH_atr_330 2 2 0.000794407
Cicer arietinum L. Ca_LG4_v3 3 CH_car_42 3 3 0.000000318032
Citrullus lanatus CG_Chr10 3 CH_cla_175 2 2 0.000887115
Erigeron canadensis Conyza_canadensis_scaffold:5 3 CH_eca_114 3 3 0.0000000604069
Gossypium hirsutum A08 3 CH_ghi_324 3 6 0.00000470422
Gossypium hirsutum D08 3 CH_ghi_347 3 7 0.00000823154
Gossypium raimondii Chr04 3 CH_gra_155 3 6 0.00000172406
Helianthus annuus HanXRQChr16 3 CH_han_682 2 2 0.000579643
Lonicera japonica GWHAAZE00000004 3 CH_lonja_197 4 6 0.00000000690798
Magnolia biondii Chr16 3 CH_mbi_255 3 3 0.000000778378
Magnolia biondii Chr16 3 CH_mbi_57 5 5 0.0000000000000330508
Petunia axillaris Peaxi162Scf00359 3 CH_pax_133 3 5 0.00000259807
Pisum sativum chr1LG6 3 CH_psa_380 2 2 0.000782452
Rhododendron simsii chr04 3 CH_rsi_411 2 2 0.000193592
Simmondsia chinensis GWHAASQ00000013 3 CH_sci_67 3 3 0.000000217487
Selenicereus undatus Scaffold_2055 3 CH_sun_196 2 2 0.000435983
Theobroma cacao Chromosome_1 3 CH_tca_394 2 2 0.000732386
Utricularia gibba unitig_699 3 CH_ugi_146 2 2 0.000820479
Utricularia gibba unitig_62 3 CH_ugi_147 2 2 0.000820479
Amborella trichopoda AmTr_v1.0_scaffold00019 4 CH_atr_330 2 2 0.000794407
Cicer arietinum L. Ca_LG4_v3 4 CH_car_42 3 3 0.000000318032
Citrullus lanatus CG_Chr10 4 CH_cla_175 2 2 0.000887115
Erigeron canadensis Conyza_canadensis_scaffold:5 4 CH_eca_114 3 3 0.0000000604069
Gossypium hirsutum A08 4 CH_ghi_324 3 6 0.00000470422
Gossypium hirsutum D08 4 CH_ghi_347 3 7 0.00000823154
Gossypium raimondii Chr04 4 CH_gra_155 3 6 0.00000172406
Helianthus annuus HanXRQChr16 4 CH_han_682 2 2 0.000579643
Lonicera japonica GWHAAZE00000004 4 CH_lonja_197 4 6 0.00000000690798
Magnolia biondii Chr16 4 CH_mbi_255 3 3 0.000000778378
Magnolia biondii Chr16 4 CH_mbi_57 5 5 0.0000000000000330508
Petunia axillaris Peaxi162Scf00359 4 CH_pax_133 3 5 0.00000259807
Pisum sativum chr1LG6 4 CH_psa_380 2 2 0.000782452
Rhododendron simsii chr04 4 CH_rsi_411 2 2 0.000193592
Simmondsia chinensis GWHAASQ00000013 4 CH_sci_67 3 3 0.000000217487
Selenicereus undatus Scaffold_2055 4 CH_sun_196 2 2 0.000435983
Theobroma cacao Chromosome_1 4 CH_tca_394 2 2 0.000732386
Utricularia gibba unitig_699 4 CH_ugi_146 2 2 0.000820479
Utricularia gibba unitig_62 4 CH_ugi_147 2 2 0.000820479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001