Functional clusters
Information
- Type Gene Ontology
- Description 1-deoxy-D-xylulose-5-phosphate synthase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | AmTr_v1.0_scaffold00019 | 3 | CH_atr_330 | 2 | 2 | 0.000794407 |
Cicer arietinum L. | Ca_LG4_v3 | 3 | CH_car_42 | 3 | 3 | 0.000000318032 |
Citrullus lanatus | CG_Chr10 | 3 | CH_cla_175 | 2 | 2 | 0.000887115 |
Erigeron canadensis | Conyza_canadensis_scaffold:5 | 3 | CH_eca_114 | 3 | 3 | 0.0000000604069 |
Gossypium hirsutum | A08 | 3 | CH_ghi_324 | 3 | 6 | 0.00000470422 |
Gossypium hirsutum | D08 | 3 | CH_ghi_347 | 3 | 7 | 0.00000823154 |
Gossypium raimondii | Chr04 | 3 | CH_gra_155 | 3 | 6 | 0.00000172406 |
Helianthus annuus | HanXRQChr16 | 3 | CH_han_682 | 2 | 2 | 0.000579643 |
Lonicera japonica | GWHAAZE00000004 | 3 | CH_lonja_197 | 4 | 6 | 0.00000000690798 |
Magnolia biondii | Chr16 | 3 | CH_mbi_255 | 3 | 3 | 0.000000778378 |
Magnolia biondii | Chr16 | 3 | CH_mbi_57 | 5 | 5 | 0.0000000000000330508 |
Petunia axillaris | Peaxi162Scf00359 | 3 | CH_pax_133 | 3 | 5 | 0.00000259807 |
Pisum sativum | chr1LG6 | 3 | CH_psa_380 | 2 | 2 | 0.000782452 |
Rhododendron simsii | chr04 | 3 | CH_rsi_411 | 2 | 2 | 0.000193592 |
Simmondsia chinensis | GWHAASQ00000013 | 3 | CH_sci_67 | 3 | 3 | 0.000000217487 |
Selenicereus undatus | Scaffold_2055 | 3 | CH_sun_196 | 2 | 2 | 0.000435983 |
Theobroma cacao | Chromosome_1 | 3 | CH_tca_394 | 2 | 2 | 0.000732386 |
Utricularia gibba | unitig_699 | 3 | CH_ugi_146 | 2 | 2 | 0.000820479 |
Utricularia gibba | unitig_62 | 3 | CH_ugi_147 | 2 | 2 | 0.000820479 |
Amborella trichopoda | AmTr_v1.0_scaffold00019 | 4 | CH_atr_330 | 2 | 2 | 0.000794407 |
Cicer arietinum L. | Ca_LG4_v3 | 4 | CH_car_42 | 3 | 3 | 0.000000318032 |
Citrullus lanatus | CG_Chr10 | 4 | CH_cla_175 | 2 | 2 | 0.000887115 |
Erigeron canadensis | Conyza_canadensis_scaffold:5 | 4 | CH_eca_114 | 3 | 3 | 0.0000000604069 |
Gossypium hirsutum | A08 | 4 | CH_ghi_324 | 3 | 6 | 0.00000470422 |
Gossypium hirsutum | D08 | 4 | CH_ghi_347 | 3 | 7 | 0.00000823154 |
Gossypium raimondii | Chr04 | 4 | CH_gra_155 | 3 | 6 | 0.00000172406 |
Helianthus annuus | HanXRQChr16 | 4 | CH_han_682 | 2 | 2 | 0.000579643 |
Lonicera japonica | GWHAAZE00000004 | 4 | CH_lonja_197 | 4 | 6 | 0.00000000690798 |
Magnolia biondii | Chr16 | 4 | CH_mbi_255 | 3 | 3 | 0.000000778378 |
Magnolia biondii | Chr16 | 4 | CH_mbi_57 | 5 | 5 | 0.0000000000000330508 |
Petunia axillaris | Peaxi162Scf00359 | 4 | CH_pax_133 | 3 | 5 | 0.00000259807 |
Pisum sativum | chr1LG6 | 4 | CH_psa_380 | 2 | 2 | 0.000782452 |
Rhododendron simsii | chr04 | 4 | CH_rsi_411 | 2 | 2 | 0.000193592 |
Simmondsia chinensis | GWHAASQ00000013 | 4 | CH_sci_67 | 3 | 3 | 0.000000217487 |
Selenicereus undatus | Scaffold_2055 | 4 | CH_sun_196 | 2 | 2 | 0.000435983 |
Theobroma cacao | Chromosome_1 | 4 | CH_tca_394 | 2 | 2 | 0.000732386 |
Utricularia gibba | unitig_699 | 4 | CH_ugi_146 | 2 | 2 | 0.000820479 |
Utricularia gibba | unitig_62 | 4 | CH_ugi_147 | 2 | 2 | 0.000820479 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |