Functional clusters

Information

  • Type Gene Ontology
  • Description transaminase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 3 CH_acertr_475 4 19 0.000596306
Brassica carinata ChrC01 3 CH_bca_324 4 4 0.00000113208
Brassica oleracea C8 3 CH_bol_222 4 7 0.0000161488
Cannabis sativa NC_044379.1 3 CH_cansat_291 3 4 0.000318956
Citrus clementina scaffold_2 3 CH_ccl_100 5 5 0.000000000326984
Carpinus fangiana Cfa06 3 CH_cfa_248 3 3 0.000190147
Chenopodium quinoa C_Quinoa_Scaffold_2306 3 CH_cqu_466 3 3 0.000422913
Durio zibethinus NW_019167849.1 3 CH_dzi_140 4 5 0.00000171632
Eutrema salsugineum scaffold_15 3 CH_esa_135 4 7 0.000022494
Eutrema salsugineum scaffold_1 3 CH_esa_218 3 3 0.000297664
Lactuca sativa Lsat_1_v8_lg_8 3 CH_lsa_87 6 9 0.0000000000273578
Malus domestica Chr08 3 CH_mdo_501 3 3 0.000123287
Quercus lobata 8 3 CH_qlo_537 4 5 0.00000167899
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_621 3 4 0.000198433
Salvia bowleyana GWHASIU00000005 3 CH_sbo_101 5 5 0.0000000000493057
Sequoiadendron giganteum chr6 3 CH_sgi_179 7 8 8.40566e-16
Sapria himalayana scaffold12_13443846 3 CH_shi_42 4 4 0.00000000984414
Schrenkiella parvula ch7-4 3 CH_spa_143 3 3 0.000205506
Tarenaya hassleriana NW_010962392.1 3 CH_tha_173 3 7 0.000573018
Acer truncatum chr8 4 CH_acertr_475 4 19 0.000596306
Brassica carinata ChrC01 4 CH_bca_324 4 4 0.00000113208
Brassica oleracea C8 4 CH_bol_222 4 7 0.0000161488
Cannabis sativa NC_044379.1 4 CH_cansat_291 3 4 0.000318956
Citrus clementina scaffold_2 4 CH_ccl_100 5 5 0.000000000326984
Carpinus fangiana Cfa06 4 CH_cfa_248 3 3 0.000190147
Chenopodium quinoa C_Quinoa_Scaffold_2306 4 CH_cqu_466 3 3 0.000422913
Durio zibethinus NW_019167849.1 4 CH_dzi_140 4 5 0.00000171632
Eutrema salsugineum scaffold_15 4 CH_esa_135 4 7 0.000022494
Eutrema salsugineum scaffold_1 4 CH_esa_218 3 3 0.000297664
Lactuca sativa Lsat_1_v8_lg_8 4 CH_lsa_87 6 9 0.0000000000273578
Malus domestica Chr08 4 CH_mdo_501 3 3 0.000123287
Quercus lobata 8 4 CH_qlo_537 4 5 0.00000167899
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_621 3 4 0.000198433
Salvia bowleyana GWHASIU00000005 4 CH_sbo_101 5 5 0.0000000000493057
Sequoiadendron giganteum chr6 4 CH_sgi_179 7 8 8.40566e-16
Sapria himalayana scaffold12_13443846 4 CH_shi_42 4 4 0.00000000984414
Schrenkiella parvula ch7-4 4 CH_spa_143 3 3 0.000205506
Tarenaya hassleriana NW_010962392.1 4 CH_tha_173 3 7 0.000573018

Available child term results

Ontology identifier Description Number of clusters
GO:0003867 4-aminobutyrate transaminase activity 18
GO:0003992 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity 6
GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity 18
GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity 4
GO:0004084 branched-chain-amino-acid transaminase activity 54
GO:0004360 glutamine-fructose-6-phosphate transaminase (isomerizing) activity 4
GO:0004400 histidinol-phosphate transaminase activity 6
GO:0004587 ornithine-oxo-acid transaminase activity 6
GO:0004648 O-phospho-L-serine:2-oxoglutarate aminotransferase activity 8
GO:0004760 serine-pyruvate transaminase activity 2
GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity 8
GO:0010285 L,L-diaminopimelate aminotransferase activity 6
GO:0033853 aspartate-prephenate aminotransferase activity 4
GO:0034387 4-aminobutyrate:pyruvate transaminase activity 4
GO:0046820 4-amino-4-deoxychorismate synthase activity 6
GO:0047958 glycine:2-oxoglutarate aminotransferase activity 4
GO:0052654 L-leucine transaminase activity 56
GO:0062045 L-lysine alpha-aminotransferase 6
GO:0080130 L-phenylalanine:2-oxoglutarate aminotransferase activity 14

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001