Functional clusters

Information

  • Type Gene Ontology
  • Description zinc ion binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 3 CH_aag_12 30 73 0.00000000000000391466
Anthoceros agrestis Sc2ySwM_117 3 CH_aag_14 29 75 0.000000000000116914
Anthoceros agrestis Sc2ySwM_117 3 CH_aag_169 6 6 0.000580068
Anthoceros agrestis Sc2ySwM_228 3 CH_aag_20 23 52 0.00000000000935868
Anthoceros agrestis Sc2ySwM_340 3 CH_aag_28 26 80 0.000000000808334
Anthoceros agrestis Sc2ySwM_369 3 CH_aag_56 17 41 0.000000244074
Anthoceros agrestis Sc2ySwM_362 3 CH_aag_6 30 54 5.29071e-20
Anthoceros agrestis Sc2ySwM_344 3 CH_aag_83 9 12 0.0000166437
Anthoceros agrestis Sc2ySwM_369 3 CH_aag_99 15 42 0.0000490819
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 3 CH_arhy_494 6 8 0.0000931672
Brassica carinata ChrB07 3 CH_bca_579 6 9 0.0000794342
Beta vulgaris Chr1_EL10_PGA_scaffold3 3 CH_bvu_200 5 5 0.000213569
Capsicum annuum PGAv.1.6.scaffold1069 3 CH_can_151 7 7 0.0000000452088
Capsicum annuum PGAv.1.6.scaffold1144 3 CH_can_23 17 21 3.72741e-21
Daucus carota DCARv2_Chr3 3 CH_dca_270 5 5 0.000125646
Erigeron canadensis Conyza_canadensis_scaffold:8 3 CH_eca_121 29 69 0.000000102531
Erigeron canadensis Conyza_canadensis_scaffold:1 3 CH_eca_208 25 62 0.00000970631
Erigeron canadensis Conyza_canadensis_scaffold:9 3 CH_eca_210 28 76 0.00001013
Erigeron canadensis Conyza_canadensis_scaffold:1 3 CH_eca_215 27 72 0.0000132572
Erigeron canadensis Conyza_canadensis_scaffold:8 3 CH_eca_233 28 79 0.0000286584
Erigeron canadensis Conyza_canadensis_scaffold:9 3 CH_eca_290 27 78 0.000105036
Erigeron canadensis Conyza_canadensis_scaffold:6 3 CH_eca_333 27 79 0.00014469
Erigeron canadensis Conyza_canadensis_scaffold:2 3 CH_eca_347 23 61 0.000239246
Erigeron canadensis Conyza_canadensis_scaffold:5 3 CH_eca_474 26 80 0.000929383
Erigeron canadensis Conyza_canadensis_scaffold:9 3 CH_eca_475 22 60 0.000932644
Erythranthe guttata scaffold_4 3 CH_egut_182 7 8 0.000000695974
Malus domestica Chr17 3 CH_mdo_515 8 23 0.000156579
Petunia axillaris Peaxi162Scf00635 3 CH_pax_165 7 11 0.0000223004
Phaseolus vulgaris Chr03 3 CH_pvu_208 8 17 0.0000258707
Phaseolus vulgaris Chr04 3 CH_pvu_94 8 9 0.000000011169
Quercus lobata CM012294 3 CH_qlo_918 5 5 0.000349125
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_278 9 18 0.000000138257
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_537 6 9 0.0000657644
Solanum pennellii Spenn-ch01 3 CH_spe_103 29 76 0.0000000053521
Solanum pennellii Spenn-ch04 3 CH_spe_143 28 80 0.000000168095
Solanum pennellii Spenn-ch01 3 CH_spe_361 24 80 0.000202065
Zea mays 2 3 CH_zma_69 10 16 0.00000000483697
Anthoceros agrestis Sc2ySwM_344 4 CH_aag_12 30 73 0.00000000000000391466
Anthoceros agrestis Sc2ySwM_117 4 CH_aag_14 29 75 0.000000000000116914
Anthoceros agrestis Sc2ySwM_117 4 CH_aag_169 6 6 0.000580068
Anthoceros agrestis Sc2ySwM_228 4 CH_aag_20 23 52 0.00000000000935868
Anthoceros agrestis Sc2ySwM_340 4 CH_aag_28 26 80 0.000000000808334
Anthoceros agrestis Sc2ySwM_369 4 CH_aag_56 17 41 0.000000244074
Anthoceros agrestis Sc2ySwM_362 4 CH_aag_6 30 54 5.29071e-20
Anthoceros agrestis Sc2ySwM_344 4 CH_aag_83 9 12 0.0000166437
Anthoceros agrestis Sc2ySwM_369 4 CH_aag_99 15 42 0.0000490819
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 4 CH_arhy_494 6 8 0.0000931672
Brassica carinata ChrB07 4 CH_bca_579 6 9 0.0000794342
Beta vulgaris Chr1_EL10_PGA_scaffold3 4 CH_bvu_200 5 5 0.000213569
Capsicum annuum PGAv.1.6.scaffold1069 4 CH_can_151 7 7 0.0000000452088
Capsicum annuum PGAv.1.6.scaffold1144 4 CH_can_23 17 21 3.72741e-21
Daucus carota DCARv2_Chr3 4 CH_dca_270 5 5 0.000125646
Erigeron canadensis Conyza_canadensis_scaffold:8 4 CH_eca_121 29 69 0.000000102531
Erigeron canadensis Conyza_canadensis_scaffold:1 4 CH_eca_208 25 62 0.00000970631
Erigeron canadensis Conyza_canadensis_scaffold:9 4 CH_eca_210 28 76 0.00001013
Erigeron canadensis Conyza_canadensis_scaffold:1 4 CH_eca_215 27 72 0.0000132572
Erigeron canadensis Conyza_canadensis_scaffold:8 4 CH_eca_233 28 79 0.0000286584
Erigeron canadensis Conyza_canadensis_scaffold:9 4 CH_eca_290 27 78 0.000105036
Erigeron canadensis Conyza_canadensis_scaffold:6 4 CH_eca_333 27 79 0.00014469
Erigeron canadensis Conyza_canadensis_scaffold:2 4 CH_eca_347 23 61 0.000239246
Erigeron canadensis Conyza_canadensis_scaffold:5 4 CH_eca_474 26 80 0.000929383
Erigeron canadensis Conyza_canadensis_scaffold:9 4 CH_eca_475 22 60 0.000932644
Erythranthe guttata scaffold_4 4 CH_egut_182 7 8 0.000000695974
Malus domestica Chr17 4 CH_mdo_515 8 23 0.000156579
Petunia axillaris Peaxi162Scf00635 4 CH_pax_165 7 11 0.0000223004
Phaseolus vulgaris Chr03 4 CH_pvu_208 8 17 0.0000258707
Phaseolus vulgaris Chr04 4 CH_pvu_94 8 9 0.000000011169
Quercus lobata CM012294 4 CH_qlo_918 5 5 0.000349125
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_278 9 18 0.000000138257
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_537 6 9 0.0000657644
Solanum pennellii Spenn-ch01 4 CH_spe_103 29 76 0.0000000053521
Solanum pennellii Spenn-ch04 4 CH_spe_143 28 80 0.000000168095
Solanum pennellii Spenn-ch01 4 CH_spe_361 24 80 0.000202065
Zea mays 2 4 CH_zma_69 10 16 0.00000000483697

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001