Functional clusters
Information
- Type Gene Ontology
- Description protein tyrosine/serine/threonine phosphatase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr10 | 3 | CH_camsi_179 | 5 | 11 | 0.00000000575477 |
| Capsicum annuum | PGAv.1.6.scaffold1447 | 3 | CH_can_108 | 5 | 10 | 0.00000000178635 |
| Capsicum annuum | PGAv.1.6.scaffold1339 | 3 | CH_can_43 | 8 | 19 | 1.26595e-16 |
| Capsella rubella | scaffold_6 | 3 | CH_cru_198 | 3 | 4 | 0.0000365487 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_296 | 3 | 7 | 0.000120363 |
| Gossypium hirsutum | D06 | 3 | CH_ghi_516 | 3 | 5 | 0.000250277 |
| Prunus persica | Pp07 | 3 | CH_ppe_397 | 3 | 7 | 0.000237961 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_551 | 4 | 31 | 0.0000749355 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_746 | 3 | 10 | 0.000656353 |
| Camellia sinensis var. sinensis | Chr10 | 4 | CH_camsi_179 | 5 | 11 | 0.00000000575477 |
| Capsicum annuum | PGAv.1.6.scaffold1447 | 4 | CH_can_108 | 5 | 10 | 0.00000000178635 |
| Capsicum annuum | PGAv.1.6.scaffold1339 | 4 | CH_can_43 | 8 | 19 | 1.26595e-16 |
| Capsella rubella | scaffold_6 | 4 | CH_cru_198 | 3 | 4 | 0.0000365487 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_296 | 3 | 7 | 0.000120363 |
| Gossypium hirsutum | D06 | 4 | CH_ghi_516 | 3 | 5 | 0.000250277 |
| Prunus persica | Pp07 | 4 | CH_ppe_397 | 3 | 7 | 0.000237961 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_551 | 4 | 31 | 0.0000749355 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_746 | 3 | 10 | 0.000656353 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |