Functional clusters
Information
- Type Gene Ontology
- Description primary amine oxidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr4 | 3 | CH_acertr_223 | 3 | 4 | 0.00000655861 |
| Acer truncatum | ctg752_3 | 3 | CH_acertr_346 | 3 | 9 | 0.000137543 |
| Actinidia chinensis | Lachesis_group9 | 3 | CH_ach_142 | 3 | 7 | 0.0000866546 |
| Actinidia chinensis | Lachesis_group6 | 3 | CH_ach_20 | 4 | 4 | 0.000000000875261 |
| Aquilegia oxysepala | CHR07 | 3 | CH_aox_97 | 3 | 3 | 0.000000810447 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 3 | CH_arhy_390 | 3 | 3 | 0.0000066686 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 3 | CH_arhy_391 | 3 | 3 | 0.0000066686 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 3 | CH_arhy_392 | 3 | 3 | 0.0000066686 |
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_310 | 3 | 10 | 0.0000156769 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 3 | CH_atr_48 | 4 | 4 | 0.0000000000526467 |
| Brassica carinata | ChrC07 | 3 | CH_bca_358 | 3 | 3 | 0.00000250458 |
| Brassica napus | C02 | 3 | CH_bna_365 | 3 | 5 | 0.0000169244 |
| Brassica oleracea | C8 | 3 | CH_bol_164 | 3 | 3 | 0.00000108977 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 3 | CH_bvu_114 | 3 | 3 | 0.00000169655 |
| Camellia sinensis var. sinensis | Chr5 | 3 | CH_camsi_19 | 8 | 9 | 1.55578e-23 |
| Chara braunii | BFEA01000681 | 3 | CH_cbr_103 | 2 | 2 | 0.0000719269 |
| Coffea canephora | chr11 | 3 | CH_ccan_302 | 2 | 2 | 0.00023424 |
| Coffea canephora | chr3 | 3 | CH_ccan_46 | 4 | 24 | 0.000000000812633 |
| Carpinus fangiana | Cfa06 | 3 | CH_cfa_81 | 4 | 5 | 0.00000000322484 |
| Carya illinoinensis | Chr02 | 3 | CH_cil_154 | 4 | 5 | 0.00000000487469 |
| Cucumis melo | chr05 | 3 | CH_cme_110 | 3 | 3 | 0.000000560766 |
| Carica papaya | supercontig_58 | 3 | CH_cpa_77 | 3 | 3 | 0.000000474494 |
| Cucumis sativus L. | chr6 | 3 | CH_csa_121 | 3 | 3 | 0.00000125433 |
| Davidia involucrata | GWHABJS00000016 | 3 | CH_din_227 | 3 | 5 | 0.000042743 |
| Davidia involucrata | GWHABJS00000014 | 3 | CH_din_62 | 5 | 9 | 0.0000000000915521 |
| Eucalyptus grandis | Chr08 | 3 | CH_egr_115 | 7 | 8 | 8.05951e-19 |
| Fragaria x ananassa | Fvb4-4 | 3 | CH_fan_237 | 3 | 3 | 0.00000399052 |
| Fragaria x ananassa | Fvb4-3 | 3 | CH_fan_238 | 3 | 3 | 0.00000399052 |
| Fragaria vesca | Fvb4 | 3 | CH_fve_23 | 6 | 7 | 1.91773e-16 |
| Glycine max | Gm20 | 3 | CH_gma_93 | 4 | 4 | 0.00000000145267 |
| Helianthus annuus | HanXRQChr13 | 3 | CH_han_365 | 3 | 4 | 0.00000407592 |
| Hydrangea macrophylla | Hma1.2p1_0745F.1 | 3 | CH_hma_71 | 3 | 3 | 0.000000370226 |
| Lonicera japonica | GWHAAZE00000003 | 3 | CH_lonja_111 | 5 | 5 | 0.000000000000421468 |
| Malus domestica | Chr16 | 3 | CH_mdo_69 | 5 | 7 | 0.000000000000977818 |
| Medicago truncatula | chr4 | 3 | CH_mtr_397 | 3 | 4 | 0.00000460762 |
| Olea europaea | chr4 | 3 | CH_oeu_354 | 2 | 2 | 0.000800683 |
| Petunia axillaris | Peaxi162Scf00092 | 3 | CH_pax_99 | 3 | 3 | 0.000000623712 |
| Prunus persica | Pp01 | 3 | CH_ppe_223 | 3 | 3 | 0.00000100167 |
| Populus trichocarpa | Chr10 | 3 | CH_ptr_229 | 3 | 3 | 0.000000826885 |
| Phaseolus vulgaris | Chr07 | 3 | CH_pvu_96 | 4 | 5 | 0.0000000141551 |
| Quercus lobata | 6 | 3 | CH_qlo_92 | 8 | 19 | 1.7551e-18 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_83 | 6 | 10 | 0.00000000000000237993 |
| Salvia bowleyana | GWHASIU00000007 | 3 | CH_sbo_203 | 3 | 3 | 0.00000037262 |
| Sapria himalayana | scaffold19_10581841 | 3 | CH_shi_6 | 6 | 12 | 3.55772e-16 |
| Trochodendron aralioides | group0 | 3 | CH_tar_238 | 3 | 6 | 0.000030903 |
| Theobroma cacao | Chromosome_4 | 3 | CH_tca_64 | 5 | 9 | 0.000000000012553 |
| Tripterygium wilfordii | NC_052245.1 | 3 | CH_twi_178 | 3 | 6 | 0.0000205284 |
| Vigna mungo | CM024071.1 | 3 | CH_vmu_54 | 4 | 5 | 0.00000000736271 |
| Vitis vinifera | chr5 | 3 | CH_vvi_140 | 4 | 7 | 0.0000000630095 |
| Acer truncatum | chr4 | 4 | CH_acertr_223 | 3 | 4 | 0.00000655861 |
| Acer truncatum | ctg752_3 | 4 | CH_acertr_346 | 3 | 9 | 0.000137543 |
| Actinidia chinensis | Lachesis_group9 | 4 | CH_ach_142 | 3 | 7 | 0.0000866546 |
| Actinidia chinensis | Lachesis_group6 | 4 | CH_ach_20 | 4 | 4 | 0.000000000875261 |
| Aquilegia oxysepala | CHR07 | 4 | CH_aox_97 | 3 | 3 | 0.000000810447 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 4 | CH_arhy_390 | 3 | 3 | 0.0000066686 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 4 | CH_arhy_391 | 3 | 3 | 0.0000066686 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 4 | CH_arhy_392 | 3 | 3 | 0.0000066686 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_310 | 3 | 10 | 0.0000156769 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 4 | CH_atr_48 | 4 | 4 | 0.0000000000526467 |
| Brassica carinata | ChrC07 | 4 | CH_bca_358 | 3 | 3 | 0.00000250458 |
| Brassica napus | C02 | 4 | CH_bna_365 | 3 | 5 | 0.0000169244 |
| Brassica oleracea | C8 | 4 | CH_bol_164 | 3 | 3 | 0.00000108977 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 4 | CH_bvu_114 | 3 | 3 | 0.00000169655 |
| Camellia sinensis var. sinensis | Chr5 | 4 | CH_camsi_19 | 8 | 9 | 1.55578e-23 |
| Chara braunii | BFEA01000681 | 4 | CH_cbr_103 | 2 | 2 | 0.0000719269 |
| Coffea canephora | chr11 | 4 | CH_ccan_302 | 2 | 2 | 0.00023424 |
| Coffea canephora | chr3 | 4 | CH_ccan_46 | 4 | 24 | 0.000000000812633 |
| Carpinus fangiana | Cfa06 | 4 | CH_cfa_81 | 4 | 5 | 0.00000000322484 |
| Carya illinoinensis | Chr02 | 4 | CH_cil_154 | 4 | 5 | 0.00000000487469 |
| Cucumis melo | chr05 | 4 | CH_cme_110 | 3 | 3 | 0.000000560766 |
| Carica papaya | supercontig_58 | 4 | CH_cpa_77 | 3 | 3 | 0.000000474494 |
| Cucumis sativus L. | chr6 | 4 | CH_csa_121 | 3 | 3 | 0.00000125433 |
| Davidia involucrata | GWHABJS00000016 | 4 | CH_din_227 | 3 | 5 | 0.000042743 |
| Davidia involucrata | GWHABJS00000014 | 4 | CH_din_62 | 5 | 9 | 0.0000000000915521 |
| Eucalyptus grandis | Chr08 | 4 | CH_egr_115 | 7 | 8 | 8.05951e-19 |
| Fragaria x ananassa | Fvb4-4 | 4 | CH_fan_237 | 3 | 3 | 0.00000399052 |
| Fragaria x ananassa | Fvb4-3 | 4 | CH_fan_238 | 3 | 3 | 0.00000399052 |
| Fragaria vesca | Fvb4 | 4 | CH_fve_23 | 6 | 7 | 1.91773e-16 |
| Glycine max | Gm20 | 4 | CH_gma_93 | 4 | 4 | 0.00000000145267 |
| Helianthus annuus | HanXRQChr13 | 4 | CH_han_365 | 3 | 4 | 0.00000407592 |
| Hydrangea macrophylla | Hma1.2p1_0745F.1 | 4 | CH_hma_71 | 3 | 3 | 0.000000370226 |
| Lonicera japonica | GWHAAZE00000003 | 4 | CH_lonja_111 | 5 | 5 | 0.000000000000421468 |
| Malus domestica | Chr16 | 4 | CH_mdo_69 | 5 | 7 | 0.000000000000977818 |
| Medicago truncatula | chr4 | 4 | CH_mtr_397 | 3 | 4 | 0.00000460762 |
| Olea europaea | chr4 | 4 | CH_oeu_354 | 2 | 2 | 0.000800683 |
| Petunia axillaris | Peaxi162Scf00092 | 4 | CH_pax_99 | 3 | 3 | 0.000000623712 |
| Prunus persica | Pp01 | 4 | CH_ppe_223 | 3 | 3 | 0.00000100167 |
| Populus trichocarpa | Chr10 | 4 | CH_ptr_229 | 3 | 3 | 0.000000826885 |
| Phaseolus vulgaris | Chr07 | 4 | CH_pvu_96 | 4 | 5 | 0.0000000141551 |
| Quercus lobata | 6 | 4 | CH_qlo_92 | 8 | 19 | 1.7551e-18 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_83 | 6 | 10 | 0.00000000000000237993 |
| Salvia bowleyana | GWHASIU00000007 | 4 | CH_sbo_203 | 3 | 3 | 0.00000037262 |
| Sapria himalayana | scaffold19_10581841 | 4 | CH_shi_6 | 6 | 12 | 3.55772e-16 |
| Trochodendron aralioides | group0 | 4 | CH_tar_238 | 3 | 6 | 0.000030903 |
| Theobroma cacao | Chromosome_4 | 4 | CH_tca_64 | 5 | 9 | 0.000000000012553 |
| Tripterygium wilfordii | NC_052245.1 | 4 | CH_twi_178 | 3 | 6 | 0.0000205284 |
| Vigna mungo | CM024071.1 | 4 | CH_vmu_54 | 4 | 5 | 0.00000000736271 |
| Vitis vinifera | chr5 | 4 | CH_vvi_140 | 4 | 7 | 0.0000000630095 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |