Functional clusters

Information

  • Type Gene Ontology
  • Description primary amine oxidase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 3 CH_acertr_223 3 4 0.00000655861
Acer truncatum ctg752_3 3 CH_acertr_346 3 9 0.000137543
Actinidia chinensis Lachesis_group9 3 CH_ach_142 3 7 0.0000866546
Actinidia chinensis Lachesis_group6 3 CH_ach_20 4 4 0.000000000875261
Aquilegia oxysepala CHR07 3 CH_aox_97 3 3 0.000000810447
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 3 CH_arhy_390 3 3 0.0000066686
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 3 CH_arhy_391 3 3 0.0000066686
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 3 CH_arhy_392 3 3 0.0000066686
Arabidopsis thaliana Chr1 3 CH_ath_310 3 10 0.0000156769
Amborella trichopoda AmTr_v1.0_scaffold00012 3 CH_atr_48 4 4 0.0000000000526467
Brassica carinata ChrC07 3 CH_bca_358 3 3 0.00000250458
Brassica napus C02 3 CH_bna_365 3 5 0.0000169244
Brassica oleracea C8 3 CH_bol_164 3 3 0.00000108977
Beta vulgaris Chr5_EL10_PGA_scaffold2 3 CH_bvu_114 3 3 0.00000169655
Camellia sinensis var. sinensis Chr5 3 CH_camsi_19 8 9 1.55578e-23
Chara braunii BFEA01000681 3 CH_cbr_103 2 2 0.0000719269
Coffea canephora chr11 3 CH_ccan_302 2 2 0.00023424
Coffea canephora chr3 3 CH_ccan_46 4 24 0.000000000812633
Carpinus fangiana Cfa06 3 CH_cfa_81 4 5 0.00000000322484
Carya illinoinensis Chr02 3 CH_cil_154 4 5 0.00000000487469
Cucumis melo chr05 3 CH_cme_110 3 3 0.000000560766
Carica papaya supercontig_58 3 CH_cpa_77 3 3 0.000000474494
Cucumis sativus L. chr6 3 CH_csa_121 3 3 0.00000125433
Davidia involucrata GWHABJS00000016 3 CH_din_227 3 5 0.000042743
Davidia involucrata GWHABJS00000014 3 CH_din_62 5 9 0.0000000000915521
Eucalyptus grandis Chr08 3 CH_egr_115 7 8 8.05951e-19
Fragaria x ananassa Fvb4-4 3 CH_fan_237 3 3 0.00000399052
Fragaria x ananassa Fvb4-3 3 CH_fan_238 3 3 0.00000399052
Fragaria vesca Fvb4 3 CH_fve_23 6 7 1.91773e-16
Glycine max Gm20 3 CH_gma_93 4 4 0.00000000145267
Helianthus annuus HanXRQChr13 3 CH_han_365 3 4 0.00000407592
Hydrangea macrophylla Hma1.2p1_0745F.1 3 CH_hma_71 3 3 0.000000370226
Lonicera japonica GWHAAZE00000003 3 CH_lonja_111 5 5 0.000000000000421468
Malus domestica Chr16 3 CH_mdo_69 5 7 0.000000000000977818
Medicago truncatula chr4 3 CH_mtr_397 3 4 0.00000460762
Olea europaea chr4 3 CH_oeu_354 2 2 0.000800683
Petunia axillaris Peaxi162Scf00092 3 CH_pax_99 3 3 0.000000623712
Prunus persica Pp01 3 CH_ppe_223 3 3 0.00000100167
Populus trichocarpa Chr10 3 CH_ptr_229 3 3 0.000000826885
Phaseolus vulgaris Chr07 3 CH_pvu_96 4 5 0.0000000141551
Quercus lobata 6 3 CH_qlo_92 8 19 1.7551e-18
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_83 6 10 0.00000000000000237993
Salvia bowleyana GWHASIU00000007 3 CH_sbo_203 3 3 0.00000037262
Sapria himalayana scaffold19_10581841 3 CH_shi_6 6 12 3.55772e-16
Trochodendron aralioides group0 3 CH_tar_238 3 6 0.000030903
Theobroma cacao Chromosome_4 3 CH_tca_64 5 9 0.000000000012553
Tripterygium wilfordii NC_052245.1 3 CH_twi_178 3 6 0.0000205284
Vigna mungo CM024071.1 3 CH_vmu_54 4 5 0.00000000736271
Vitis vinifera chr5 3 CH_vvi_140 4 7 0.0000000630095
Acer truncatum chr4 4 CH_acertr_223 3 4 0.00000655861
Acer truncatum ctg752_3 4 CH_acertr_346 3 9 0.000137543
Actinidia chinensis Lachesis_group9 4 CH_ach_142 3 7 0.0000866546
Actinidia chinensis Lachesis_group6 4 CH_ach_20 4 4 0.000000000875261
Aquilegia oxysepala CHR07 4 CH_aox_97 3 3 0.000000810447
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 4 CH_arhy_390 3 3 0.0000066686
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 4 CH_arhy_391 3 3 0.0000066686
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 4 CH_arhy_392 3 3 0.0000066686
Arabidopsis thaliana Chr1 4 CH_ath_310 3 10 0.0000156769
Amborella trichopoda AmTr_v1.0_scaffold00012 4 CH_atr_48 4 4 0.0000000000526467
Brassica carinata ChrC07 4 CH_bca_358 3 3 0.00000250458
Brassica napus C02 4 CH_bna_365 3 5 0.0000169244
Brassica oleracea C8 4 CH_bol_164 3 3 0.00000108977
Beta vulgaris Chr5_EL10_PGA_scaffold2 4 CH_bvu_114 3 3 0.00000169655
Camellia sinensis var. sinensis Chr5 4 CH_camsi_19 8 9 1.55578e-23
Chara braunii BFEA01000681 4 CH_cbr_103 2 2 0.0000719269
Coffea canephora chr11 4 CH_ccan_302 2 2 0.00023424
Coffea canephora chr3 4 CH_ccan_46 4 24 0.000000000812633
Carpinus fangiana Cfa06 4 CH_cfa_81 4 5 0.00000000322484
Carya illinoinensis Chr02 4 CH_cil_154 4 5 0.00000000487469
Cucumis melo chr05 4 CH_cme_110 3 3 0.000000560766
Carica papaya supercontig_58 4 CH_cpa_77 3 3 0.000000474494
Cucumis sativus L. chr6 4 CH_csa_121 3 3 0.00000125433
Davidia involucrata GWHABJS00000016 4 CH_din_227 3 5 0.000042743
Davidia involucrata GWHABJS00000014 4 CH_din_62 5 9 0.0000000000915521
Eucalyptus grandis Chr08 4 CH_egr_115 7 8 8.05951e-19
Fragaria x ananassa Fvb4-4 4 CH_fan_237 3 3 0.00000399052
Fragaria x ananassa Fvb4-3 4 CH_fan_238 3 3 0.00000399052
Fragaria vesca Fvb4 4 CH_fve_23 6 7 1.91773e-16
Glycine max Gm20 4 CH_gma_93 4 4 0.00000000145267
Helianthus annuus HanXRQChr13 4 CH_han_365 3 4 0.00000407592
Hydrangea macrophylla Hma1.2p1_0745F.1 4 CH_hma_71 3 3 0.000000370226
Lonicera japonica GWHAAZE00000003 4 CH_lonja_111 5 5 0.000000000000421468
Malus domestica Chr16 4 CH_mdo_69 5 7 0.000000000000977818
Medicago truncatula chr4 4 CH_mtr_397 3 4 0.00000460762
Olea europaea chr4 4 CH_oeu_354 2 2 0.000800683
Petunia axillaris Peaxi162Scf00092 4 CH_pax_99 3 3 0.000000623712
Prunus persica Pp01 4 CH_ppe_223 3 3 0.00000100167
Populus trichocarpa Chr10 4 CH_ptr_229 3 3 0.000000826885
Phaseolus vulgaris Chr07 4 CH_pvu_96 4 5 0.0000000141551
Quercus lobata 6 4 CH_qlo_92 8 19 1.7551e-18
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_83 6 10 0.00000000000000237993
Salvia bowleyana GWHASIU00000007 4 CH_sbo_203 3 3 0.00000037262
Sapria himalayana scaffold19_10581841 4 CH_shi_6 6 12 3.55772e-16
Trochodendron aralioides group0 4 CH_tar_238 3 6 0.000030903
Theobroma cacao Chromosome_4 4 CH_tca_64 5 9 0.000000000012553
Tripterygium wilfordii NC_052245.1 4 CH_twi_178 3 6 0.0000205284
Vigna mungo CM024071.1 4 CH_vmu_54 4 5 0.00000000736271
Vitis vinifera chr5 4 CH_vvi_140 4 7 0.0000000630095

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001